Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01570 ATGGAGGACAGAACTATAGGAAGAAATGGTAGTAGCTCTAGAAAGGGTAGCTTTAGGTTGGGGTTGGGAATGGATGGGAAAAAAGATCACACTGTGGTTGAGCTTGGTAGCATTGACACACAGAGACTTCTTCTAAGCAATGGAGAGAGAGAGAAAAAATTACAACCTCTCACCAACACTCTCTCTCCAAGGCAAATGAAATCTCTCTATGCTCTCTGTGACACTATCTTACCTTCTGTCGACCACTTTGTTGACACTTCCGATGAATCTGTCACTAAATTCTATCAGATTTCAGCTTCCATGACCGGAACACCTGAACGTTTTGGGTGCATGATAAGTGAGAAATTGAAGCACCCCTTGACAGGGTTACTGAAGTTTGTGTTATGGCTGTTGTCTACGTGGTTTGGGACATTAATTTTCTGTGGCATGGGATGCTTCTCTACCCAATTCCCCTTCATTCACACCTATCCTGATTTGCCTCTTCAGAAACGCCAACAGATTATGCGTTCATGGTCTCTCAGTTACCTTCGTCACTTTAGAATGCTGTTCAGGACCATCAAACTTCTCACTCTCCTAATCTTCTTTACTCAGATAGATGAATCAGAAGACAACGTTGCATGGAAAGCAATTGGATACTGCGGACCTGATCCAGAATTCAAAGCTCGGTTGAAGAGCCACTTTTTAGATGGAACATCTAAAGGAGGACAAGAGGATAAGGAAGATGAAGATGCTGAAGAGGTGATAGGACCACTTTACAAAGGTCTAGTCCATCTCAATTACCCACGAGACATCACTGCAGATGCTCTAAAACGACTCGGATTCCCTGTATCGGTCATCCGTCAGAAGCATAAAGCTGCTGCAAACTTATCATCTCCTTCTTTGGTGATACAATGTGATGCAGTGGTGGTTGGTTCTGGCTCAGGAGGTGGAGTGATAGCTGGTGTTCTTGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAGAAAGGAGGTTATTCTGCTAGGAACAATCTTTCTCTTCTTGAAGGACCAACCATGGATCAAATGTACCTCAATGGTGGTCTGGTTGCAAGTGATGATATGGGTGTGTTCATTCTATCAGGATCCACTGTTGGTGGAGGGTCAGCAATCAACTGGTCTGCGTGCATTAAAACCCCTCAGCATGTGTGCAAGGAGTGGAGTGATAAACATGGTCTAGAGCTGTTTGAGAGTGAACTGTATAGAGAAGCCTTGAATGCTGTTTGTGAGAAGATGGAAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCAATACTAAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTTAGTAACATTCCTAGGAATTCTGCGTCAGATCACTACTGTGGCTGGTGTTGCATGGGTTGTAAGGATGGGAGGAAGAAGGGTACCTCAGAAACATGGTTAGTGGACTTGGTGAAATCTGGCAATGGAGCAATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGGAAGGGAGGGATAGAAAGATTGCGCGTGGAGTGGCTTTTGAATTTGAATATAAAGGGACTAAAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTGAGTACTCCAGCATTGCTTAAAAAAAGTGGCTTGAGGAATCAGAACATAGGGAGGAACTTGCATCTTCATCCAGTGGCGATGGCTTGGGGATACTTCCCAGATGCACCTGAATCTGAGGTGTGGCCAGAGGCATATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCAACTGTTGTTGCAGAGTTTGAACAATCTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTGTCACACCATGGACTTCTGGAATCGATATAAGAGACCGAATGCGAAAGTTTTCAAGAACAGCTCATATATTTGCACTGGCAAGGGATCAAGGATCAGGGACTGTAAAAGCCCCAGATCGTATCAGTTATAAGCCGGCAGGTGTAGATGAAGAGAATTTAAAGAAAGGAATTGAGAAGGTGCTGAGAATTCTGGCAGCAGCTGGTGCTGAAGAAATTGGGACACATCATAATAAGGGAAGGACCTTAAATGTAAAGCAGGTAAGATATCATGAGTTTGAGAAATTTGTTAAAGAGGAAAGTTCAAGGTCATTGACAGACCTTACAACACCATTGTGCTCGGCACATCAAATGGGGAGTTGCCGGATGGGTTCTAATCCAAAGCAATCAGCGGTGAATCAGACAGGGGAGACATGGGAAGTGGAGGGCCTTTATGTGGCAGATACAAGTGTCTTCCCAACAGCATTGGGTGTGAATCCAATGGTTACTGTTCAAGCTATTGCTTATTGCACAGCACAATCTGTTGTTGAAGTACTTAGAAGGAAAAGAACTAAATGA 2430 0.4366 MEDRTIGRNGSSSRKGSFRLGLGMDGKKDHTVVELGSIDTQRLLLSNGEREKKLQPLTNTLSPRQMKSLYALCDTILPSVDHFVDTSDESVTKFYQISASMTGTPERFGCMISEKLKHPLTGLLKFVLWLLSTWFGTLIFCGMGCFSTQFPFIHTYPDLPLQKRQQIMRSWSLSYLRHFRMLFRTIKLLTLLIFFTQIDESEDNVAWKAIGYCGPDPEFKARLKSHFLDGTSKGGQEDKEDEDAEEVIGPLYKGLVHLNYPRDITADALKRLGFPVSVIRQKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYLNGGLVASDDMGVFILSGSTVGGGSAINWSACIKTPQHVCKEWSDKHGLELFESELYREALNAVCEKMEVQSEIEDEGFNNAILRKGCQEMGYPVSNIPRNSASDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKEGRDRKIARGVAFEFEYKGTKDICVVESKVTIVACGALSTPALLKKSGLRNQNIGRNLHLHPVAMAWGYFPDAPESEVWPEAYKKSYEGGIMTAMSTVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDQGSGTVKAPDRISYKPAGVDEENLKKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVRYHEFEKFVKEESSRSLTDLTTPLCSAHQMGSCRMGSNPKQSAVNQTGETWEVEGLYVADTSVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKRTK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01570 809 Pfam GMC oxidoreductase 665 794 IPR007867 GO:0016614
Gma01g01570 809 Gene3D - 282 604 IPR036188 -
Gma01g01570 809 MobiDBLite consensus disorder prediction 1 20 - -
Gma01g01570 809 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 14 809 - -
Gma01g01570 809 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 14 809 - -
Gma01g01570 809 PIRSF Lg_Ch_AO 48 809 IPR012400 GO:0046577
Gma01g01570 809 SUPERFAMILY FAD/NAD(P)-binding domain 296 800 IPR036188 -
Gma01g01570 809 Pfam GMC oxidoreductase 299 565 IPR000172 GO:0016614|GO:0050660
Gma01g01570 809 Gene3D - 726 806 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01570 Gma-Chr1 51251062 51260043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01570 28 803 Acyl Lipid Metabolism Gene Families AT4G19380 56.850 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01570 K17756 - gmx:100775376 1612.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01570 01 51251062 51260043 Gma01g01570 01 51251062 51260043 ECH
Gma01g01570 01 51251062 51260043 Gma09g02028 09 45862424 45870448 GST
Gma01g01570 01 51251062 51260043 Gma16g00999 16 24348491 24361991 PCT
Gma16g00999 16 24348491 24361991 Gma01g01570 01 51251062 51260043 PCT