Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00979 ATGGCCCTCAATACCACCAAGTCTAAAAAATCCACTTCACCTTCAAATTTTTACTTTTGCACCACTCTTTTCTTCATTGTCCTATTCACCATACCTGTTCTTTTCCTCCTCCATGCCCCAACCACCACCTCCATATGCACCACCCTTGCTTCCTCCCAAGCCAAAACTTGGTCTGGTGATCTTCAGTTGGTTGAATTCGCGTGGAACCGCCTCTCGTTTTTCGAACACAACCCATCACCCTTTGCTCTCAAAGTTGCTGTCTTCTCCAGGAAATGGCCTATTGGCACAACCCCTGGTGGCATGGAGCGTCATGCTCACACCCTTCACACAGCTTTGGCGCGCCGTGGCCATCAAGTTCATGTATTCACATCTCCCCCTGAAGATGAGAGCATTTCAGTCTCATCCTCTGAGGTAAACGAAAACAAACATCAAGAAGGTGCACCTTCTTCCCCATACATCCATTTCCATGAAGGTGAGCCTGGCAGGTGGCGCTACAACAAGGCGTGGGAACAGTTTGTGGAAGAAAACCAGCGAGAACCATTCCACGTTGTGCACTCAGAAAGTGTGGCACTCCCTCACTGGCTAGCACGCAACATGTCAAACCTTGCAGTGTCTTGGCATGGCATAGCCCTTGAAAGCTTGCAATCAAGCATTTTCCAGGACTTGACTCGCCGGCAAGACGAGCCTATGTCCCCTCTCTTCAACAAAAGCATACAGGGTGTTGTGCCAAAGGTGCTGAATGAGATAAGGTTCTTCAAGAATTATGCCCATCATGTTGCTATTAGTGATAGTTGTGGTGAGATGCTGAGGGATGTGTACCAAATTCCTAACAGAAGAGTCCATGTAATACTAAATGGTGTTGATGAGGATGACTTTGGAGAAGATGTTGAATTGGGAAGGGAATTCAGAACCAAAATTGGCATTCCAGGGAATGCAAGTTTGGTACTCGGTGTAGCTGGAAGATTAGTGAAGGACAAAGGCCATCCTCTGCTTCATGAAGCTTACTCGAGGCTTATAACCAAGCACCCTAATGTGTACTTGATTGTTGCTGGTTCTGGACCATGGGAGAACAGACCACAAGGGCTTGACCTTACATTGATGGAGGCAATGATGAGCGGGAAGCCTCTTTTGGCATCAAGATTTCCAAGCATTAAAGGGACTATTGTGGTCGATGATGAATATGGTTACATGTTTTCGCCGAATGTGGAGTCCCTGCAGGAGGCACTGGAAGCAGTTGTAAAGGAAGGACCACAGAGGCTAGCAAGGCGGGGCAAGGCATGCCGGGAATATGCTGCCAAAATGTTTACAGCAAGAAAGATGGCATTAGCATACGAGAGGTTATTCCTATGTATAAAAGATCGCTCATTCTGCACCTATCCTTGA 1383 0.4722 MALNTTKSKKSTSPSNFYFCTTLFFIVLFTIPVLFLLHAPTTTSICTTLASSQAKTWSGDLQLVEFAWNRLSFFEHNPSPFALKVAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQVHVFTSPPEDESISVSSSEVNENKHQEGAPSSPYIHFHEGEPGRWRYNKAWEQFVEENQREPFHVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLTRRQDEPMSPLFNKSIQGVVPKVLNEIRFFKNYAHHVAISDSCGEMLRDVYQIPNRRVHVILNGVDEDDFGEDVELGREFRTKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLITKHPNVYLIVAGSGPWENRPQGLDLTLMEAMMSGKPLLASRFPSIKGTIVVDDEYGYMFSPNVESLQEALEAVVKEGPQRLARRGKACREYAAKMFTARKMALAYERLFLCIKDRSFCTYP 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00979 460 Gene3D Glycogen Phosphorylase B; 361 449 - -
Gma16g00979 460 Gene3D Glycogen Phosphorylase B; 82 308 - -
Gma16g00979 460 Pfam Glycosyltransferase Family 4 99 290 IPR028098 -
Gma16g00979 460 PANTHER GLYCOSYLTRANSFERASE 358 460 - -
Gma16g00979 460 PANTHER GLYCOSYLTRANSFERASE 1 358 - -
Gma16g00979 460 PANTHER GLYCOSYLTRANSFERASE 1 358 - -
Gma16g00979 460 PANTHER GLYCOSYLTRANSFERASE 358 460 - -
Gma16g00979 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 448 - -
Gma16g00979 460 CDD GT4_PimA-like 84 448 - -
Gma16g00979 460 MobiDBLite consensus disorder prediction 125 146 - -
Gma16g00979 460 MobiDBLite consensus disorder prediction 124 153 - -
Gma16g00979 460 Gene3D Glycogen Phosphorylase B; 310 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00979 Gma-Chr16 23109839 23111326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00979 6 460 Glycosyltransferase AT4G19460 60.279 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00979 - - gmx:100804436 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01555 01 51044896 51046356 Gma16g00979 16 23109839 23111326 PCT
Gma09g02010 09 45691980 45693457 Gma16g00979 16 23109839 23111326 PCT
Gma16g00979 16 23109839 23111326 Gma01g01555 01 51044896 51046356 PCT
Gma16g00979 16 23109839 23111326 Gma09g02010 09 45691980 45693457 PCT