Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01555 ATGGCCTTCAACAACAAATTCAAGAAGTCCAGTTCCCCTTCTAATTTAACTTTCTTCATCACCCTTTTCTTCCTTGTCCTCTGCACCATACCAGTATTCTTACTCCTCCAAACATCCACCACAAGCACCACCCTCTCCAAAACCTGGTCAGGTGATCTTCGTTTAGCCGAATTTGCATGGAACAAACTCCCATTTCTTGAACACAACCCTTCACCGGTACCTCTCAAAATCGCTGTCTTCTCTAGAAAATGGCCTATTGGAACCATTCCTGGTGGCATGGAGCGCCATGCATACACCCTTCACACTGCTCTAGCTCAACGTGGCCACAAGGTTCATATCTTCACCTCTCCCCCACAAGAAGAAACCACTTCAACCTTCTCTTCAGACACAACCAAAGAAGCAGATGCTAACGCACCCTCTTCACCTTATATCCATTGTCATGAAGGGGAGCCGGGTAAGTGGCGCTACAACAAAGCATGGGAACAGTTTCTGGAACAAAACCAGAAAGAACCATTCGATGTTGTTCACTCAGAAAGTGTAGCACTCCCTCACTGGCTCGCTCGCGAACTTCCGAACCTTGCAGTTTCATGGCATGGCATAGCTCTTGAAAGCTTGCAATCTAGTATCTTCCAAGACTTGGCTCGTACGCAAGACGAGCCTAGATCCCCGAATTTCGACAAAGGCTTACAAGGTGTTCTCCCTAAGATTCTAAATGAGATAAGGTTCTTCAGGAAATATGCACACCATGTTGCCATTAGTGATAGTTGTGGTGAGATGTTAAGAGATGTGTACCAAATTCCCAACAAAAGAGTGCATGTAATTCTCAATGGGGTAGATAAGGATGAATTCAGAGAAGATGTGGAATTGGGAAAGGAATTTAGAATCAAAATTGGCATTCCAAGCAATGCTAGTTTAGTGCTTGGTGTAGCTGGAAGATTGGTGAAGGACAAAGGTCACCCTCTCCTTCACGAAGCATACTCTATGCTAATAACCAAGTACCCCAATGTGTATTTGATTGTAGCTGGCTCAGGACCGTGGGAGAATCGGTATAGGGACTTAGGGAGCCATGTTCTTGTTCTTGGATCAATGAGTCCTTCCATGCTAAGAGCATTCTATAATGCTATTGACATTTTTGTCAATCCTACACTTAGGCCACAAGGGCTTGATCTTACTATGATGGAAGCCATGATGAGTGGGAAGCCACTTTTGGCGTCGAGGTTTCCGAGCATCAAAGGTAGTGTTGTGGTTGATGATGCATTTGGCTTCATGTTCTCTCCCAATGTGGAGTCCCTCTTGGAGGCACTCGAAGCAGTGGTGAAGGAAGGAAAGGAAAGGCTTGCAAGGAGGGGAAAGGCATGCCGTGAATATGCAATTTCTATGTTTACTGCAACAAAGATGGCGTTGGCATATGAGAGACTATTCCTATGCATAAAAGAAGATAGATTTTGTAACTATCCTTGA 1461 0.4476 MAFNNKFKKSSSPSNLTFFITLFFLVLCTIPVFLLLQTSTTSTTLSKTWSGDLRLAEFAWNKLPFLEHNPSPVPLKIAVFSRKWPIGTIPGGMERHAYTLHTALAQRGHKVHIFTSPPQEETTSTFSSDTTKEADANAPSSPYIHCHEGEPGKWRYNKAWEQFLEQNQKEPFDVVHSESVALPHWLARELPNLAVSWHGIALESLQSSIFQDLARTQDEPRSPNFDKGLQGVLPKILNEIRFFRKYAHHVAISDSCGEMLRDVYQIPNKRVHVILNGVDKDEFREDVELGKEFRIKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSMLITKYPNVYLIVAGSGPWENRYRDLGSHVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTMMEAMMSGKPLLASRFPSIKGSVVVDDAFGFMFSPNVESLLEALEAVVKEGKERLARRGKACREYAISMFTATKMALAYERLFLCIKEDRFCNYP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01555 486 Gene3D Glycogen Phosphorylase B; 294 457 - -
Gma01g01555 486 MobiDBLite consensus disorder prediction 117 137 - -
Gma01g01555 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 474 - -
Gma01g01555 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Gma01g01555 486 CDD GT4_PimA-like 76 474 - -
Gma01g01555 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Gma01g01555 486 MobiDBLite consensus disorder prediction 117 144 - -
Gma01g01555 486 Pfam Glycosyl transferases group 1 306 447 IPR001296 GO:0016757
Gma01g01555 486 Gene3D Glycogen Phosphorylase B; 74 293 - -
Gma01g01555 486 Pfam Glycosyltransferase Family 4 91 281 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01555 Gma-Chr1 51044896 51046356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01555 1 486 Glycosyltransferase AT4G19460 63.366 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01555 - - gmx:100817087 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01555 01 51044896 51046356 Gma01g01555 01 51044896 51046356 ECH
Gma01g01555 01 51044896 51046356 Gma09g02010 09 45691980 45693457 GST
Gma01g01555 01 51044896 51046356 Gma16g00979 16 23109839 23111326 PCT
Gma16g00979 16 23109839 23111326 Gma01g01555 01 51044896 51046356 PCT