Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00966 ATGTTCAGTGGTGCCGAGTATGTGCCTATTGGTAATGATGAGTTACCTTCTCCAAGAGAAAATCACATGAGGAGAGTTTCTGTTCTTCCTCTGGTATTTCTCATCTTCTATGAGGTTTCTGGGGGACCCTTTGGTGTTGAGGACACAGTGCATGCAGCAGGTCCTCTATTAGCCCTTATGGGGTTCTTGGTTTTCCCATTCATATGGAGTGTTCCTGAGGCTCTGATCACTGCAGAGATGAGCACCATGTTCCCTGAGAACAGTGGCTATGTGGTTTGGGTCTCTTCTGCTTTGGGTCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTGATTGACAATGCTTTGTATCCAGTTCTGTTTCTTGACTATTTGAAATCAGGTATCCCTGCATTGGGTGGTGGGGTTCCCAGAACTGTTTCAACTTGGGCCTTAACTGTGGCTCTCACTTGCTTGAACTATAGGGGTTTAACCATTGTGGGAATGGTTGCAGTTCTGTTAGGTGTTTTCTCACTCCTTCCTTTTGTTGTCATGGGACTCTTGTCAATTCCAGACCTGAAACCTTCAAGATGGTGTGTGATGAATCTGGATGATGTTGATTGGAATCTGTATTTGAATACTTTGTTTTGGAACCTCAATTATTGGGACTCTATTAGTACTCTTGCTGGGGAAGTGGATAATCCAAGGAGAACTCTTCCCAAGGCTCTATTTTATGCTTTGATCCTTGTGGTTTTGGGCTATTTTTTCCCTCTTTTGATTGGCACTGGTGCTGTTCCTCTCAATAGGGACTTGTGGACTGATGGGTACTTCTCAATTATTGCTGAGATTGTTGGAGGAGTGTGGTTGAGGTGGTGGCTTCAAGCTGCTGCTGCAATGTCTAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACTCATTCCAGCTTCTAGGGATGGCAGAGAGGGGCATGCTACCCGAGTTCTTCAGCAAGAGGTCCCGTTTCGGAACCCCTCTTGTAGGAATACTCTTTTCGGCCTCTGGTGTGATCTTACTGTCATGGCTGAGTTTTCAGGAGATTGTGGCTGCTGAAAACTTCTTGTACTGCTTTGGCATGATTTTGGAGTTTGTTGCATTCATATTGTTGAGGATCAGACACCCCAATGCGTCTAGGCCTTACAAGGTTCCAGGGGGAACAGCTGGAGCAATTACTATCTGCATTCCTCCCACAGTTTTGATTTTTGTGGTGCTCGCTTTCTCCTCCAACAAAGTGCTGGTTATAAGCCTCATCGCTATGGCGATTGGCCTTGTAATGCAACCATGTCTTAAAATTATGGAGGAAAGGAGATGGATGAAGTTCTCTGTTAGATCTGAGCTCCAGGATCTTGACAATAATGAGGAGAGCATTCACTCTTTTGTGGGTTAA 1416 0.452 MFSGAEYVPIGNDELPSPRENHMRRVSVLPLVFLIFYEVSGGPFGVEDTVHAAGPLLALMGFLVFPFIWSVPEALITAEMSTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGIPALGGGVPRTVSTWALTVALTCLNYRGLTIVGMVAVLLGVFSLLPFVVMGLLSIPDLKPSRWCVMNLDDVDWNLYLNTLFWNLNYWDSISTLAGEVDNPRRTLPKALFYALILVVLGYFFPLLIGTGAVPLNRDLWTDGYFSIIAEIVGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFSKRSRFGTPLVGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFVAFILLRIRHPNASRPYKVPGGTAGAITICIPPTVLIFVVLAFSSNKVLVISLIAMAIGLVMQPCLKIMEERRWMKFSVRSELQDLDNNEESIHSFVG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00966 471 Pfam Amino acid permease 33 431 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gma16g00966 471 PIRSF AA_transporter 14 457 - -
Gma16g00966 471 PANTHER POLYAMINE TRANSPORTER PUT1 4 463 - -
Gma16g00966 471 PANTHER POLYAMINE TRANSPORTER PUT1 4 463 IPR044566 GO:0022857
Gma16g00966 471 Gene3D Amino acid/polyamine transporter I 21 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00966 Gma-Chr16 22792478 22793893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00966 7 465 Organic Solute Cotransporters AT1G31830 72.944 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00966 - - gmx:100810822 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01545 01 50959625 50962371 Gma16g00966 16 22792478 22793893 PCT
Gma09g01990 09 45500248 45503076 Gma16g00966 16 22792478 22793893 PCT
Gma16g00966 16 22792478 22793893 Gma01g01545 01 50959625 50962371 PCT
Gma16g00966 16 22792478 22793893 Gma09g01990 09 45500248 45503076 PCT