Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01545 ATGAAATTGAGAATTGCTGCTGCTAATAGACAAGCTTCCATTGAGATGGGGGAGTTCACCGGGAGTGGTGAGTATGTGACTCACGGTGAATTACCTTCCTCCAGGCCAAATCATTCAAGGAAAGTTACAGTTCTTCCTCTTGTGTTTCTCATCTTCTATGAGGTTTCAGGGGGGCCTTTCGGGGTGGAGGATACTGTGCACGCAGCAGGTCCTCTGTTAGCCCTCATTGGATTCTTGCTTTTCCCATTGATATGGAGTGTTCCTGAAGCTTTGATCACTGCTGAGATGGGTACCATGTTCCCTGAAAACAGTGGTTATGTGGTTTGGGTTTCGTCTGCTTTGGGTCCCTATTGGGGGTTTCAACAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCATTATACCCAGTTCTATTTCTTGACTATCTGAAGTCAGGAATCCCTGCTTTAGGTGGTGGATTGCCAAGAGTTATTGCAACATGGGGTCTTACTATAGTTCTCACTTACTTGAACTATAGGGGTATGACCATTGTGGGATGGGTTGCTGTTTGTTTAGGGGTTTTCTCACTCCTCCCTTTTGTGGTTATGGGGTTTTTGTCAATTCCAGACCTAAAGCCTTCAAGATGGACTGTGACAAATCTGAATGATGTTAACTGGAATTTGTATCTGAATACTCTATTTTGGAATCTCAACTATTGGGACTCCATAAGTACTCTTGCTGGAGAAGTAGAAAATCCGAAGAAAACTCTTCCGAAGGCTTTGTTTTATGCTGTGATCCTAGTAGTTCTAGGGTACTTCTTTCCTCTTCTAATTGGTACTGGTGCTGTTCCTGTCAACCGTGAGTTGTGGACAGATGGCTACTTCTCAGATATTGCTTTGATTATAGGAGGAGCATGGTTGAGATGGTGGCTTCAGGCTGCTGCTGCGATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACGCCTTCCAACTTCTAGGGATGGCTGAGAGGGGAATGTTGCCTGAGTTCTTCGGCAAGAGGTCTCGCTATGGAACACCTCTCATAGGAATACTCTTCTCAGCCTCCGGCGTGATTTTACTGTCATGGCTGAGCTTTCAAGAAATTGTTGCTGCAGAAAATTTCTTGTACTGCTTTGGAATGATTTTGGAGTTCATTGCGTTCATTCTGTTGAGGATCAAACACCCCAACGCATCCCGGCCTTACAAGATACCGGGGGGAACTGCTGGAGCAATTATCATGTGTATCCCTCCGACAATATTGATTGGTGTTGTGTTGTTTTTCTCCTCCCTTAAAGTAATGGTTATAAGCCTTATTGCTATGGCAATTGGCCTTGTGATGCAGCCTTGTCTCAAATTAGTTGAGAAAAAGAGATGGATGAAGTTTTCCTATAGTTCTGAGCTCCCTGATTTTGGCAATCAGGAGGACAATCGCTCTTTGGTGCATTAA 1461 0.4435 MKLRIAAANRQASIEMGEFTGSGEYVTHGELPSSRPNHSRKVTVLPLVFLIFYEVSGGPFGVEDTVHAAGPLLALIGFLLFPLIWSVPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGIPALGGGLPRVIATWGLTIVLTYLNYRGMTIVGWVAVCLGVFSLLPFVVMGFLSIPDLKPSRWTVTNLNDVNWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPKALFYAVILVVLGYFFPLLIGTGAVPVNRELWTDGYFSDIALIIGGAWLRWWLQAAAAMSNMGMFVAEMSSDAFQLLGMAERGMLPEFFGKRSRYGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFIAFILLRIKHPNASRPYKIPGGTAGAIIMCIPPTILIGVVLFFSSLKVMVISLIAMAIGLVMQPCLKLVEKKRWMKFSYSSELPDFGNQEDNRSLVH 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01545 486 PANTHER POLYAMINE TRANSPORTER PUT1 8 486 IPR044566 GO:0022857
Gma01g01545 486 PIRSF AA_transporter 19 483 - -
Gma01g01545 486 Pfam Amino acid permease 55 432 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gma01g01545 486 PANTHER POLYAMINE TRANSPORTER PUT1 8 486 - -
Gma01g01545 486 Gene3D Amino acid/polyamine transporter I 37 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01545 Gma-Chr1 50959625 50962371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01545 26 478 Organic Solute Cotransporters AT1G31830 76.316 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01545 - - gmx:100813355 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01545 01 50959625 50962371 Gma01g01545 01 50959625 50962371 ECH
Gma01g01545 01 50959625 50962371 Gma09g01990 09 45500248 45503076 GST
Gma01g01545 01 50959625 50962371 Gma16g00966 16 22792478 22793893 PCT
Gma16g00966 16 22792478 22793893 Gma01g01545 01 50959625 50962371 PCT