Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00820 ATGGCACAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGAGAATGTTCCTTATACAGCATATTTTGACAAGGCACGGAAAGGTCGAACTGGCACAAGGATAATAAATCCAAATGACCCCGAGGAAAATGCTGATTTAAGTTTTGATAATCCATCATCTGATAACCTACCTCCTACCAGACCTAGAACTAATTCAGAGGATCAATCCGGAAAAGGATCACTGCATTTGGAAGATGATCCCAAGAATTTTATCGAATCTCCAGCTCGTCATGACAATGTAAGCAGTAGGAGTGGCAGTAGAAGCCATGGAGTAGGTTCTGCTGATAACCGTAGAAGACATTCAACGCAAAGTACTGGGTCTGAGTACAGCATTGAACGTTCACCGCTTCATCGCCAGGCTAGAGCCCCAGGCAGAGACAGTCCCCAGTGGGAACCAAAGAATTCATATGACAGCAGTCAGGGAACACCAGGAAGGTCTCGGTTAAGACCGGCTAATCGAGGAGATGAAACACCAGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGACTGGGATGTGAATAACCCTGCATCAGCAGATGGCTTTACTCACATTTTCAACAAAGTGAGGGAGGAGAGACAAGGCGGGCCAGGACAAGTGCCAGGAACGCCTAATGAGAGACCACAACCTATTAATGGCCTATCTAATGATGACAAAGTCCAGTGTTGCTGCTTTGCGTGGGGTGGGAAAAAATGA 741 0.4602 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGTRIINPNDPEENADLSFDNPSSDNLPPTRPRTNSEDQSGKGSLHLEDDPKNFIESPARHDNVSSRSGSRSHGVGSADNRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDSSQGTPGRSRLRPANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPGQVPGTPNERPQPINGLSNDDKVQCCCFAWGGKK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00820 246 MobiDBLite consensus disorder prediction 26 191 - -
Gma16g00820 246 MobiDBLite consensus disorder prediction 74 89 - -
Gma16g00820 246 MobiDBLite consensus disorder prediction 203 230 - -
Gma16g00820 246 MobiDBLite consensus disorder prediction 46 73 - -
Gma16g00820 246 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 243 IPR040387 -
Gma16g00820 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 174 209 IPR008700 -
Gma16g00820 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
Gma16g00820 246 MobiDBLite consensus disorder prediction 147 162 - -
Gma16g00820 246 MobiDBLite consensus disorder prediction 91 128 - -
Gma16g00820 246 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00820 Gma-Chr16 13918658 13923714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00820 K13456 - gmx:100808509 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00751 03 26490781 26494702 Gma16g00820 16 13918658 13923714 GST
Gma08g03220 08 48963297 48968070 Gma16g00820 16 13918658 13923714 PCT
Gma16g00820 16 13918658 13923714 Gma08g03220 08 48963297 48968070 PCT