Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03220 ATGGCTGAGAGTGAAGACAACGTTTTAGACACAGCTCATTCTGACAAAGCCCAGAAAGGTCAGTCTGGTTCAAAGATGATTAATCCAAATGACACCAAGGAAAATTCGGACATAGTTTCTTCTGCTGACCTACCCCATTCAAAACCCAGAGTTCATTCAGAGGATCCATCTGGAAAGGGATCAGTGAGAACAACACATGAGTTACAAAAGAGTAGGGAGGATGGTGATCCTAAACAATTTACTGACTCTCCAGCTCGCCATGGTGGCGGTGATTCTTCCCATCGAGGTCATGGAGTAGGTTCTGCTGACAACCGTAAAAGACCTTCAAGACAAAGTACTGGGCCTGAGCACAACATTGACCGTTCACCCCTTCATCGCCAGGCAAAAACCCCTGGCAGAGATAGTCCTTCTTGGGAAGGAAAAAATTCATATGATAGCAGCCATGGTACCCCAGGAAGGTCCCGATTGAGACCATCTTACCGAGGGGATGAAACTCCTGATGAAGGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGATGAGAGCAACCCTGCATCAGCTGATGGCTACACTCACATTTTCAACAAAGTGCGGGAAGAGAAACAAGTGGGGGCTGGACACGTGCCAGGCACACCTAATGGGAGACAATATGCTGCTCGGAATCAACGTGCCAACGACAAAGCTCAGAGTTGCTGCTTTTGCTGGGGCAAAAAATGA 714 0.479 MAESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDIVSSADLPHSKPRVHSEDPSGKGSVRTTHELQKSREDGDPKQFTDSPARHGGGDSSHRGHGVGSADNRKRPSRQSTGPEHNIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRPSYRGDETPDEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYAARNQRANDKAQSCCFCWGKK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03220 237 MobiDBLite consensus disorder prediction 136 153 - -
Gma08g03220 237 MobiDBLite consensus disorder prediction 47 81 - -
Gma08g03220 237 MobiDBLite consensus disorder prediction 1 186 - -
Gma08g03220 237 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 3 234 - -
Gma08g03220 237 MobiDBLite consensus disorder prediction 14 42 - -
Gma08g03220 237 MobiDBLite consensus disorder prediction 157 174 - -
Gma08g03220 237 MobiDBLite consensus disorder prediction 88 128 - -
Gma08g03220 237 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 166 201 IPR008700 -
Gma08g03220 237 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 234 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03220 Gma-Chr8 48963297 48968070 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03220 K13456 - gmx:100499220 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03220 08 48963297 48968070 Gma03g00751 03 26490781 26494702 PCT
Gma08g03220 08 48963297 48968070 Gma16g00820 16 13918658 13923714 PCT
Gma03g00751 03 26490781 26494702 Gma08g03220 08 48963297 48968070 PCT
Gma16g00820 16 13918658 13923714 Gma08g03220 08 48963297 48968070 PCT