Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00803 ATGGACTGTTTCGATGAGGCGAATGGGGAGCTTGAAAATGTTGTGAGTGTTGGGTGTAGTGAAGAGGGTTCTGAGAAAGAGGCAAAGACAGATATTGGTGCAATTGAGGATGCTGTGAAGGTTCTTTTGCTTGCGCTTGGGGAAGATATCAACAGGGAAGGTCTTAGGAAGACACCACTTCGTGTTGCCAAGGCCCTTCGTGAAGGAACCAGAGGGTACAGACAAAAAGTGAAGGACATTGTTGAAGGTGCTTTATTCCCTGAAGCCGGTCTAGAAAACAATAGAATTGGTCATGCAGGCGGCACAGGTGGACTTGTGGTTGTCCGAGATCTTGACCTTTATTCCTATTGTGAGTCTTGCTTGCTACCATTCCAATTCAAGTGTCATGTGGGCTATGTCCCTTCTGGCCAAAGAGTTGTGGGTTTAAGCAAACTCTCTCGAGTGGTTGATGTATTTGCTAAACGACTCCAGGAGCCTCAGCGTCTTGCAGATGAGGTTTGTTCAGCATTGCATCAAGAAATATTGCCAGCAGGTGTAGCTATTGTACTTCAGTGTACACACATCCCCTTTCCAGACATAGAATCAATCTTTCTTGAATCGAACCAACAAGTGTGGGTGAAGACACTTGTTTTGTCAGGTTCTGGGATTTTTGAAAACAAAAGTGAAGATGCATGGTCTGATTTCTTTTGCCTTCTAAGATTTAGAGGTATCAAAATAGAAAACATTCATTTGAGAGGATCATCTGACCAATGCTGGTGTCCATCTTTGACTGCTCTTTCTGCTAAAGTTTCCTCCAAAATTGTACCAGTCAATCCCGCAATGGTGACTGCAGTATCTTCAATCCTTGATTCTCTGGGAGAAGATTCATTAAGGAAGGAGCTTGCAGGGACGCCTAGTCGATTTGTGAAATGGCTATTGAACTTCCAAAGCATTGACATGGATGTGAAGCTGAATCGTTCCCTTTGTGATGGAATAGATACTTTAAACCTCGATAGGGAGGTTAACTTCAATGACAGACAAATACATTCTGAGTTGAACTTGCCATTTTGGTCACAATGTGAGCATCATATACTTCCATTTCATGGTGTTGTTCACATAGGATACTTCCTTTCAGAAGGATCTAATCCCATTGGAAAATCCCTTTTACAGTCTGTAGTACATTTTTATGGTTTCAAACTCCAGGTTCAGGAAAGGCTTACAAGGCAAATAGCAGAAACCATTGCACCACTATTATTAGGTGGACATGTAATAGTAGTTGTAGAGGCAAGTCACACATGTATGATTTCTAGAGGAATTGAGAAGTTTGGAAGTAGTACAGCTACCATTGCTGTATTAGGTCGCTTTTCCACTGACCTCGCTGCAAGGGATGCATTCTTGCAGTGTGTTGCAAGTGCTACAACTTCTGGGGGGCAATAG 1416 0.4273 MDCFDEANGELENVVSVGCSEEGSEKEAKTDIGAIEDAVKVLLLALGEDINREGLRKTPLRVAKALREGTRGYRQKVKDIVEGALFPEAGLENNRIGHAGGTGGLVVVRDLDLYSYCESCLLPFQFKCHVGYVPSGQRVVGLSKLSRVVDVFAKRLQEPQRLADEVCSALHQEILPAGVAIVLQCTHIPFPDIESIFLESNQQVWVKTLVLSGSGIFENKSEDAWSDFFCLLRFRGIKIENIHLRGSSDQCWCPSLTALSAKVSSKIVPVNPAMVTAVSSILDSLGEDSLRKELAGTPSRFVKWLLNFQSIDMDVKLNRSLCDGIDTLNLDREVNFNDRQIHSELNLPFWSQCEHHILPFHGVVHIGYFLSEGSNPIGKSLLQSVVHFYGFKLQVQERLTRQIAETIAPLLLGGHVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLAARDAFLQCVASATTSGGQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00803 471 PANTHER GTP CYCLOHYDROLASE I 1 468 IPR001474 GO:0003934|GO:0046654
Gma16g00803 471 Gene3D - 269 316 IPR043134 -
Gma16g00803 471 Gene3D - 22 80 IPR043134 -
Gma16g00803 471 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 272 462 - -
Gma16g00803 471 Pfam GTP cyclohydrolase I 35 188 IPR020602 -
Gma16g00803 471 Pfam GTP cyclohydrolase I 276 462 IPR020602 -
Gma16g00803 471 Gene3D - 99 235 IPR043133 -
Gma16g00803 471 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 26 233 - -
Gma16g00803 471 Gene3D - 332 465 IPR043133 -
Gma16g00803 471 PANTHER GTP CYCLOHYDROLASE I 1 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00803 Gma-Chr16 11663874 11667492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00803 K01495 - gmx:100780537 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00767 03 27701572 27701785 Gma16g00803 16 11663874 11667492 GST
Gma18g01458 18 37373076 37377686 Gma16g00803 16 11663874 11667492 PCT
Gma08g03203 08 48775342 48779647 Gma16g00803 16 11663874 11667492 PCT
Gma16g00803 16 11663874 11667492 Gma18g01458 18 37373076 37377686 PCT
Gma16g00803 16 11663874 11667492 Gma08g03203 08 48775342 48779647 PCT