Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03203 ATGGGGTGTTTGGGTGATGGGCGTTTCGCTGTTGAGATTCGAAATGGAGTGAGCAATGGTTGTGGTGAAGTTGAGGATGCTGTGAAGGTTTTGTTGGAGGGTCTAGGGGAAGATGTGAACAGGGAAGGTCTTAGAAAGACACCACTTCGTGTTGCCAAGGCCCTTCGTGAAGGAACCAGAGGTTACAGACAAAAGGTGAAGGACATTGTTCAAGGTGCTTTATTCCCCGAAGCTGGTCTAGATAATAGAGTTGGTCATGCAGGGGGAGCAGGTGGACTCGTGATTGTTCGAGATCTTGACTTGTTTTCCTATTGTGAGTCCTGCTTGCTTCCATTCCCGGTCAAGTGTCATGTGGGTTATGTCCCCTCTGGTGAAAGAGTTGTTGGTTTAAGCAAGCTCTCTCGTGTTGCTGATGTATTTGCGAAACGACTTCAAGAGCCTCAGCGTCTGGCAGATGAGGTATGCTCTGCTTTACATCGGGGAATAAAGCCGGCAGGTGTTGCTATCATACTTCAATGTACACATATCCACTTTCCAGACATAGAACCAGTCTTTCTTGACTCAAACCATCAAGGGTGGGTGAAGATACTTGTTTCCTCAGGTTCTGGGGTTTTTGAGAACAAAAATGCAGATGTATGGGATGATTTCTTTGGTCTTCTTAAATTTAGAGGCATCAATATGGATAAAATTCATTTGAGAGGATCATCTGATCCATGCTGGTGTCCTTCTCAGTCTTCTCTATCTGCCAAAGTTTCCTCGAAAATAGGACCAGTCAATCCTGTAATGGTTACTGCAGTAGCTTCAATTATTGAATCTTTGGGAGAAGATCCTTTGAGGAAAGAGCTTATAGGGACTCCAAGTAGGTTTGTGAAATGGTTGATGAACTTTCAAAACAGTAACTTTGATATGAAGTTGAATGGTTTTCTTTGTGATGGGATAGATTCTTTGAATGCCAATGAGGAGGTTAACGTCAACCAAAAAATAACCTCTGAGCTGAACATACCTTTTTGGTCACAATGTGAGCATCATTTGCTTCCCTTTCATGGTGTTGTTCACATAGGATACCTCATGTCTGATGGATTCAATCCTATGGGAAAATTGCTTTTACAATCAATAGTACATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTGCCCCACTGTTAGGCGGAGATGTGATAGTAGTTGTAGAGGCAAGCCACACATGTATGATTTCGAGGGGAATTGAGAAGTTTGGAAGTAGTACGGCTACTATTGCAGTGTTAGGACATTTTTCAACCAACCCTACTGCAAGGGCATCATTCTTGGAGAGTATTCCACGTCCTACATCATCTGGGGAGCAATGA 1374 0.4323 MGCLGDGRFAVEIRNGVSNGCGEVEDAVKVLLEGLGEDVNREGLRKTPLRVAKALREGTRGYRQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCLLPFPVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEVCSALHRGIKPAGVAIILQCTHIHFPDIEPVFLDSNHQGWVKILVSSGSGVFENKNADVWDDFFGLLKFRGINMDKIHLRGSSDPCWCPSQSSLSAKVSSKIGPVNPVMVTAVASIIESLGEDPLRKELIGTPSRFVKWLMNFQNSNFDMKLNGFLCDGIDSLNANEEVNVNQKITSELNIPFWSQCEHHLLPFHGVVHIGYLMSDGFNPMGKLLLQSIVHFYGFKLQVQERLTRQIAETIAPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGHFSTNPTARASFLESIPRPTSSGEQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03203 457 Gene3D - 87 223 IPR043133 -
Gma08g03203 457 Pfam GTP cyclohydrolase I 25 176 IPR020602 -
Gma08g03203 457 Pfam GTP cyclohydrolase I 264 448 IPR020602 -
Gma08g03203 457 Gene3D - 22 70 IPR043134 -
Gma08g03203 457 PANTHER GTP CYCLOHYDROLASE I 22 453 IPR001474 GO:0003934|GO:0046654
Gma08g03203 457 PANTHER GTP CYCLOHYDROLASE I 1 22 453 - -
Gma08g03203 457 Gene3D - 258 300 IPR043134 -
Gma08g03203 457 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 260 449 - -
Gma08g03203 457 Gene3D - 317 450 IPR043133 -
Gma08g03203 457 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 21 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03203 Gma-Chr8 48775342 48779647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03203 K01495 - gmx:100816351 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01458 18 37373076 37377686 Gma08g03203 08 48775342 48779647 GST
Gma08g03203 08 48775342 48779647 Gma03g00767 03 27701572 27701785 PCT
Gma08g03203 08 48775342 48779647 Gma16g00803 16 11663874 11667492 PCT
Gma03g00767 03 27701572 27701785 Gma08g03203 08 48775342 48779647 PCT
Gma16g00803 16 11663874 11667492 Gma08g03203 08 48775342 48779647 PCT