Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00199 ATGGAAAGCAGCCATAACATGAGGCAAAGCACCATGGAAACTGAGTTTGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTCTCTGAACTGTGTGGAGGTTTCAAGCTTCTATCGGACCCGGAAACTGGTTTGATCACGAGCGAGAGTCTAAGGACAAACTCAGCTCTTCTTGGCATGGAAGGGATGAGCAAGGAGGATGCAGATGCTATGGTTAGACAAGGTGATCTTGATGGAGATGGAAAGCTTAATGAAACTGAGTTTTGCATCCTTATGGTGAGGCTTAGCCCTGGAATGATGGAAGATGCTGAGTCATGGCTGGAGAAGGCAATTGATGAAGAGCTTAGGAAGTCATCATCTTAG 378 0.4683 MESSHNMRQSTMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSKEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEELRKSSS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00199 125 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Gma16g00199 125 SUPERFAMILY EF-hand 21 122 IPR011992 -
Gma16g00199 125 Gene3D - 13 125 - -
Gma16g00199 125 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Gma16g00199 125 Pfam EF-hand domain pair 47 99 IPR002048 GO:0005509
Gma16g00199 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 - -
Gma16g00199 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00199 Gma-Chr16 2120307 2121629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00199 10 120 EF-hand Containing Proteins AT2G46600 74.775 9.65e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00199 K24345 - gmx:100802677 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00199 16 2120307 2121629 Gma16g00199 16 2120307 2121629 ECH
Gma07g00502 07 4734372 4735725 Gma16g00199 16 2120307 2121629 GST
Gma19g02429 19 52774715 52775610 Gma16g00199 16 2120307 2121629 PCT
Gma03g02383 03 48954081 48954926 Gma16g00199 16 2120307 2121629 PCT
Gma16g00199 16 2120307 2121629 Gma19g02429 19 52774715 52775610 PCT
Gma16g00199 16 2120307 2121629 Gma03g02383 03 48954081 48954926 PCT