Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02383 ATGGAAAGCAACCAATCGGCAAAAGAGATCACGGTGGAAGTAGAAGAGTTCGAGGACTTGCTGCCCGTGATGGCAGAGAAGTTGGATGTGGAGACCTTTGTGTCTGAGTTGTGTGGGGGTTTCAAGCTTCTGGCTGACCCAGAAACGGGTTTGATCACTGGTGAGAGTCTTATGAGGAACTCAGCTATGTTGGGTATGGATGGGATGAGCAAAGAGGAAGCAGAAACCATGGTTAGACAGGGAGATCTTGATGGGGATGGGAAGCTCAATGAAACTGAGTTTTGCATCCTTATGGTGAGGCTTAGCCCTGGGATCATGGAAGATGCTGAGACCTGGCTTCACAAGGCACTTGAACAAGAGCTCACCAATTCCTCAACTTAA 381 0.4856 MESNQSAKEITVEVEEFEDLLPVMAEKLDVETFVSELCGGFKLLADPETGLITGESLMRNSAMLGMDGMSKEEAETMVRQGDLDGDGKLNETEFCILMVRLSPGIMEDAETWLHKALEQELTNSST 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02383 126 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Gma03g02383 126 SUPERFAMILY EF-hand 17 107 IPR011992 -
Gma03g02383 126 PANTHER CALCIUM-BINDING PROTEIN KIC 4 123 IPR044205 GO:0005509
Gma03g02383 126 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Gma03g02383 126 Gene3D - 14 126 - -
Gma03g02383 126 PANTHER CALCIUM-BINDING PROTEIN KIC 4 123 - -
Gma03g02383 126 Pfam EF-hand domain pair 48 100 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02383 Gma-Chr3 48954081 48954926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02383 16 125 EF-hand Containing Proteins AT2G46600 73.636 1.60e-56 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02383 K24345 - gmx:100787197 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02383 03 48954081 48954926 Gma03g02383 03 48954081 48954926 ECH
Gma19g02429 19 52774715 52775610 Gma03g02383 03 48954081 48954926 GST
Gma03g02383 03 48954081 48954926 Gma07g00502 07 4734372 4735725 PCT
Gma03g02383 03 48954081 48954926 Gma16g00199 16 2120307 2121629 PCT
Gma07g00502 07 4734372 4735725 Gma03g02383 03 48954081 48954926 PCT
Gma16g00199 16 2120307 2121629 Gma03g02383 03 48954081 48954926 PCT