Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00120 ATGGATGCAGTGGACAAGACTTTCTCTGAGCTTGTCAGCATTGTCAAATCATGGCTTCCCTGGCGATCTGAGCCAGTAAATGTGTCTAGGGATTTTTGGATGCCCGACCAGAGTTGTAGAGTATGCTACGAGTGTGATTCGCAGTTCACCTTATTTAACCGTAAACACCACTGTCGTCTTTGTGGGCGAATTTTCTGTAACAAGTGTACAACAAACTCGGTTCCTGCCCCATTTAGCAACCAAAGGAATTCCTGGGATGAGTTGGAAAAGATTCGCGTTTGTAATTATTGTTACAAGCAATGGGAGCAGGGCGTAGTTGCTTTGGATAAGAGTATTCCGGTTTCCAATCTGGATAACAGTGCTTCAGGATCAACTTCAAGTGTGGCTAGCAGTAAAACCAGTGCCACTGCAAACAGTAGTAATATTACTCTTTGCTCCATGCCTTATTCAGTTGGGTCTTATCAACCAATGCAACAGGGTTCTGTTCTGAACCTGCATAAATCACCTGTGAAGGAAAAAGACCCCGATACTGATAGGGAAGGTTTATCAGCAAATGGAGGGAGGAGTGATCTTGTAGCAGACCTGGGTGATCCATTACCAAAGCAATATGGATTCTCAATAAACAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCGGTCAGATTCTGATATGAGGCATTATCCTCAGGTGAATAACTACTATGAACGAGCTGAGCTTGATGGGATAGGCAACATTGATGGCTCACAGAAAGTGGATCATGATGGAGAAAGCATTAATGCAAAACTCCCTTCAAACTACAGTTTTGACACACAGGGTTTGGAAGAAGCCCCAGTTATTGCCAAAATTGAAGATGAACCTTATATCTGTGATGAAAATGAAGCCCCTTCCTCATTGTATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAAGATGAACAGGAAGCTATTTTGTTTGATGATGATGATGATCATGATGGGAATGCCACCGGAGAGTGGGGCTATCTGCGCAGTTCAAGCAGTTTTGGAAGTGGTGAGTATCGACACAGAGATAGGTCAAGCGAAGAGCACAAGACTGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTATCTCAGCTGTTACAGGTTGAGAACTTACCCGTTGAAGATAATGACAAAAACAGTTGGTTGGAGATTGTCACGTCTCTGTCATGGGAAGCTGCTACTTTGTTGAAACCAGATATGAGCAAAGGtggtgggatggacccagctggttatgtgaaagtcaaatgcataacatgtgggagccgcattgaaagTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCACCGGCGAATGACGTCAAAAGTGGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTAGAGTATCAACGTGTTACCAACCTCTTATCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCACACCAACCAAACATCTTCTTGGTGGAGAAATCAGTCTCACGATATGCACAGGAATATCTTCTTGCAAAGGACATATCTCTGGTTCTCAATGTCAAGAGACCACTTTTGGAGCGTGTAGCACGTTGCACAGGCACTCAAATAGTTCCTTCAATTGATCATCTTTCGTCACAAAAGTTGGGTTACTGTGAAACATTTCGTGTAGAAAAGTTTCTTGAAGACCTAAATAGTGCTGGTCAGGGTGGGAAAAAAACAATGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTGGGTTTCACAATTTTACTTAAAGGTGCTGACAAGGATGAATTGAAGAAGGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTATCATTTGGCTTTGGAGACATCTTTTCTTGCAGATGAAGGAGTCTCCCTGCCAGAAATTCCATTAAACAGTCTGGCCCTTCCAGATAAATCATCATTCATTCAGAGGTCTATTTCGACAGTTCCTGGTTTTGGTGTTGCTGACAATGAAACACCTCAAGGACAAGAACCTGACACTGAACCACAGAGAACCAGAAGTCTCACAGTTGCTGATCTAGCCTCATCAACCTGCAGTACAGGGCCATGTGTGTCTAATGGTGCTTTTCAATCTATGCCACTTGGATCAAGTATCAACCATTCAACTGCCTTGTACTCCTCCATTGTTGCTTCAGGAAAATCAATTCCAGAATCGCACCGTAATAAGCTTCTTTCATGCACTAGTAGAGACACAAATGAAATGGACTCCAAACAACCTGTTGTGGAAGAAACTTCTAGAGCGGACAACACAGTTGTCGGGGATGATCCTACTGTAGATGACCTTGGATCTTCAGAGAAATTATATCAAGGCATGTCAGCTGACACTCCACAAAATTGGAACAGCAAAATCTCTAAAAACCAGTTAAGTGGGTCAGGATCTCTATCTCCAATAGATGTTCAAAACCATCCCGAGAACCTTGGAATCACAAATGAAGAGCCAGTTCTCATAAAAGAAGAGTTTCCTCCATCTCCCTCTGACCATCAAAGCATTTTGGTGTCATTGTCCTCCCGGTGTGTTTGGAAGGGAACTGTATGTGAGAGGTCCCATCTCTTTCGAATTAAATACTATGGCAGCTTTGATAAACCATTGGGTCGATTTCTGCGGGACCATTTATTTGATCAGAGTTATCAATGCCATTCTTGTGAAATGCCATCGGAAGCACATGTGCATTGCTATACTCATCGACAGGGAACACTTACCATATCCGTCAAGAAACTACCAGAAATTATCCTACCTGGTGAAAGGGATGGAAAGATTTGGATGTGGCATAGGTGCTTGCGGTGTCCAAGAATCAATGGCTTTCCTCCTGCTACACAGAGAATAGTAATGTCTGATGCTGCTTGGGGTTTATCATTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCACGCTGCAGCCAGCAGGGTGGCAAGCTGTGGTCACTCTTTACACAGAGATTGCCTTCGTTTTTATGGATTTGGAAGAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGGAATCAGGACTGGATACAACAAGAATCTGATGAGGTGGTCAATCGGGCAGAGCTTTTATTCTCTGAGGTACTCAATGGTCTTAGTCAAATTGTTGAGAAAAGATCTAATGCAGTCCAAGTCAGTAATGGCCACAAATCACCTGAGTTAAGACGCCAAGTTGCTGAACTAGAGGGGATGTTGCAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAGCCTGGGATTGATGTTCTGGAAATTAATCGATTGTGGAGGCAGTTACTTTTTCAATCATATATGTGGGATCACCGCCTTATTTATGCAGCCAACTTAGTCCATTCCAACAATGAATCTGGTTCATGCAGTCCAATTTCAGAGGATAAGGAGAAACCTACTGATGAAAATCAGATGAGCATTAACTCTATTTATGGTGATCTAAAGCTTAACGATAGCCCCAGCCATGGAGGAGGAAGTGTTGTATTTGATGGAAAATTTTCACTTGATGCAGTGCATCAAGAAATTGACATGGCCAAAAATAAAAATCATGAGAAAGATGCCGAACATAATCTTTCAAATAGCAAAAGCATAAATGATCAATCCAACCTTTTAGAACCTGAATTGGGTGTTCGCAGAGCTCTCTCTGATGGGCCATTCCCTGTCATTCCTAGTTTGTCTGAAACACTAGATGCAAAATGGACTGGTGAAAACCACTCAGGATATGGAATTCAAAAGGATAACAGTTCTGTAAATCCTGATATACTTATGGCAGATGCTTTGACAACCAGTGCACAAAAAGAAATATATTATCTAGGGGATCGTACAGAAGATCAAAAAGGTCATGATAATATGGAAGACTCTTCAAGCTGGTTGGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAACAAGAACCTTTTTGCTAGTACACAGAAGTTTGATACCCTAGTTGACTACAATCCTGTTTATGTATCATGTTTCCGGAAGCAGGAACTCCTGGGTGGGGCAAGGCTGCTTCTGCCAATTGGTGTCAATGAAACTGTAATTCCAGTATATGATGATGAACCCTCAAGTATTATAGCTTACGCCTTAATGTCACCAGAATATCATTTGCAATTGACTGATGAAGGAGAAAGGCCAAGAGAAGGAAATGAGTTCATTTCATCATATTTTTCTGATTCAGGCACCTTGCAGTCATTCTCATCTGTTGATGAAACAGCTTTTGATTCTCAGAAAAGTTTTGGATCGATAGAGGAAATGATATTTTCCATGTCTGGGTCTCGTAATTCATCAATATTGGACCCAATGTTATATACTAAGGCTATGCATGCTAGAGTTTCCTTTGGAGTAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTACGCCAAGCGATTTGAAGCCTTAAGAAGGGTCTGTTGTCCTTCAGAGCTCGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAAAGTAATGTATTCTTTGCAAAAACTTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAGCTTGAGTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGGACTGTGACCCGACTTTATGATCTTAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACCGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATTTTCGTGGGAAACAAAGCTAAACGATTGTTAGAGAGAGCTGTCTGGAATGACACTGGTTTTCTTGCTTCAGTTGATGTGATGGACTATTCTTTACTGGTTGGAGTGGATGAAGAAAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTATACTTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGTATCCTTGGAGGACCAAAGAACACACCTCCAACAGTAATATCTCCCAAACAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCAGATCAGTGGTCTCCCCCTTCTATTATTCCTAGTCATTCTCAGTCTGATTTTGGTGAAGACAGCACACAACCTAGGACTCCAGCTGAATGA 5448 0.411 MDAVDKTFSELVSIVKSWLPWRSEPVNVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPFSNQRNSWDELEKIRVCNYCYKQWEQGVVALDKSIPVSNLDNSASGSTSSVASSKTSATANSSNITLCSMPYSVGSYQPMQQGSVLNLHKSPVKEKDPDTDREGLSANGGRSDLVADLGDPLPKQYGFSINRSDDDEDEYGVYRSDSDMRHYPQVNNYYERAELDGIGNIDGSQKVDHDGESINAKLPSNYSFDTQGLEEAPVIAKIEDEPYICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDEQEAILFDDDDDHDGNATGEWGYLRSSSSFGSGEYRHRDRSSEEHKTVMKNVVDGHFRALVSQLLQVENLPVEDNDKNSWLEIVTSLSWEAATLLKPDMSKGGGMDPAGYVKVKCITCGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPNIFLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERVARCTGTQIVPSIDHLSSQKLGYCETFRVEKFLEDLNSAGQGGKKTMKTLMFFEGCPKPLGFTILLKGADKDELKKVKHVVQYGVFAAYHLALETSFLADEGVSLPEIPLNSLALPDKSSFIQRSISTVPGFGVADNETPQGQEPDTEPQRTRSLTVADLASSTCSTGPCVSNGAFQSMPLGSSINHSTALYSSIVASGKSIPESHRNKLLSCTSRDTNEMDSKQPVVEETSRADNTVVGDDPTVDDLGSSEKLYQGMSADTPQNWNSKISKNQLSGSGSLSPIDVQNHPENLGITNEEPVLIKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYQCHSCEMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPHTLIFDYGNQDWIQQESDEVVNRAELLFSEVLNGLSQIVEKRSNAVQVSNGHKSPELRRQVAELEGMLQKEKLEFEETLQKILNQEKRNGQPGIDVLEINRLWRQLLFQSYMWDHRLIYAANLVHSNNESGSCSPISEDKEKPTDENQMSINSIYGDLKLNDSPSHGGGSVVFDGKFSLDAVHQEIDMAKNKNHEKDAEHNLSNSKSINDQSNLLEPELGVRRALSDGPFPVIPSLSETLDAKWTGENHSGYGIQKDNSSVNPDILMADALTTSAQKEIYYLGDRTEDQKGHDNMEDSSSWLGMPFLNFYRQFNKNLFASTQKFDTLVDYNPVYVSCFRKQELLGGARLLLPIGVNETVIPVYDDEPSSIIAYALMSPEYHLQLTDEGERPREGNEFISSYFSDSGTLQSFSSVDETAFDSQKSFGSIEEMIFSMSGSRNSSILDPMLYTKAMHARVSFGVDGPLGKVKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSIIPSHSQSDFGEDSTQPRTPAE 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00120 1815 Coils Coil 1105 1139 - -
Gma16g00120 1815 CDD FYVE_PIKfyve_Fab1 32 99 - -
Gma16g00120 1815 Pfam TCP-1/cpn60 chaperonin family 407 647 IPR002423 GO:0005524
Gma16g00120 1815 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1458 1639 IPR027484 -
Gma16g00120 1815 CDD Fab1_TCP 388 659 - -
Gma16g00120 1815 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 107 IPR013083 -
Gma16g00120 1815 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1458 1782 IPR002498 GO:0016307|GO:0046488
Gma16g00120 1815 Gene3D GroEL 453 625 IPR027409 -
Gma16g00120 1815 SUPERFAMILY GroEL apical domain-like 453 625 IPR027409 -
Gma16g00120 1815 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1805 - -
Gma16g00120 1815 Gene3D - 1641 1783 - -
Gma16g00120 1815 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Gma16g00120 1815 MobiDBLite consensus disorder prediction 772 794 - -
Gma16g00120 1815 SMART fyve_4 28 103 IPR000306 GO:0046872
Gma16g00120 1815 CDD PIPKc_PIKfyve 1519 1782 IPR044769 GO:0000285
Gma16g00120 1815 Coils Coil 1230 1250 - -
Gma16g00120 1815 MobiDBLite consensus disorder prediction 168 183 - -
Gma16g00120 1815 SMART PIPK_2 1492 1783 IPR002498 GO:0016307|GO:0046488
Gma16g00120 1815 SUPERFAMILY FYVE/PHD zinc finger 31 102 IPR011011 -
Gma16g00120 1815 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1805 - -
Gma16g00120 1815 SUPERFAMILY SAICAR synthase-like 1510 1782 - -
Gma16g00120 1815 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1558 1724 IPR002498 GO:0016307|GO:0046488
Gma16g00120 1815 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Gma16g00120 1815 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00120 Gma-Chr16 1181048 1190850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00120 2 1815 EF-hand Containing Proteins AT3G14270 60.724 0.0 2100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00120 K00921 - gmx:100777340 3613.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00427 07 3870785 3880464 Gma16g00120 16 1181048 1190850 GST