Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00427 ATGGATGCAGTGGACAAGACTTTTTCTGAGCTTGTCAGCATTGTCAAATCATGGATTCCCTGGCGATCTGAGCCAGTAAATGTGTCTAGAGATTTTTGGATGCCCGATCAGAGTTGTAGAGTATGCTACGAGTGTGATTCACAGTTCACCTTATTTAACCGTAAACACCACTGTCGTCTTTGTGGGCGAATTTTCTGTAACAAGTGTACAACAAACTCGGTTCCTGCCCCATTTAGCAACCAAAGGAATTCTTGGGATGAGTTGGAAAAGATTCGCGTTTGTAATTATTGTTACAAGCAATGGGAGCAGGGCATAGTTGCTTTTGATAACAGTATTCCTGTTTCCAATCTGGATAATAGTGCTTCCGGATCAACTTCAAGCGTGGCTAGCAGTAAAACCAGTGCCACTGCAAACAGTAGTAATATTACTCTTTGCTCCATGCCATATTCAGTTGGGTCTTATCAACCAATGCAACAGGGTTCTGTTCTGAACCTGCATAAATCACCTGTGAAGGGGAAAGACCCCGATACTGATAGGGAAGGCTTATCAGCATTAGGAGGGAGGAGTGATCTTGTAGCAGACCTGGGTGATCCATTACCGAAGCAATACAGATTCTCAATAAACAGGTATGATGATGATGAGGATGAGTATGGTGTATATCGGTCAGATTCTGATATGAGGGATTATCCTCAAGTGAATAACTACTATGTACAAGCTGAGCTTCACGGGATAGGCAACATTGATGGCTCACAGAAAGTGGATCTTGATGGAGAAAACACTAATGCCAAACTCCCTTCAAACTACAGTTTTGACACACAGGATTTGGAAGGAGCCCAAGTTATTGCCAAAAATGAAGATGAACCTTATATCTGTGATGAAAATGAAGCCCCTTCCTCGTTGTATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAAGATGAACAGGAAGCTATTCTGTTTGATGATGATGATGATCATGACGGGAATGCCACCGGAGAGTGGGGCTATCTGCGCAGTTCAAGCAGTTTTGGAAGTGGTGAGTACCGACACAGAGATAGGTCAAGCGAGGAGCACAAGAATGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTATCTCAGCTGTTACAGGTTGAGAACTTACCTGTCGAAGATAATGACAAAAACAGTTGGTTGGAGATTGTCACATCTCTGTCATGGGAAGCTGCTACTTTATTGAAACCAGATATGAGCAAAGGTGGTGGGATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCACCGGAGAATGACGTCAAAAGTGGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTAGAGTATCAACGTGTTACCAACCTCTTATCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCACACCAACCAAACATCTTGTTGGTGGAGAAATCAGTCTCGCGATATGCGCAGGAATATCTTCTTGCAAAGGACATATCTTTGGTTCTCAATGTCAAGAGACCACTTTTGGAGCGCGTAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTGTCATCACAAAAGTTGGGTTACTGTGAAACATTTCATGTTGAAAAGTTTCTTGAAGACCTAAATAGTGCTGGTCAGGGTGGGAAAAAAACAATGAAAACATTGATGTTTTTCGAAGGTTGCCCAAAACCATTGGGTTTCACAATTTTACTTAAAGGTGCTGACAAGGATGAATTGAAGAAGGTAAAACATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTTTGGAGACATCTTTTCTTGCAGATGAAGGAGTCTCCCTGCCAGAAATTCCATTAAACAGTCTGGCCCTTCCTGATAAATCATCATCCATTCAGAGGTCTATTTCAACAGTTCCTGGTTTCGGCATTGCTGACAATGAAAAGCCTCAAGGGCTAGAACCTTACACTGAACCACAGAGAACCAAAAGTCTCACAGCTGCTGATCTAGCCTCGTCAACCTGCGGTACAGGGCCGTGTTTGTCTAATGGTGCTTCTCAATCTATGGCACTTGGATCAAGTCTCAACTATTCAACTGCCTTATACTCCTCCATTGTTGCTTCAGGAAATTCAATTCCAGAATCGCACCATAATAAGCTTCTTTCATGCACTAGTAGAGACACAAATGAAATGAACTCCAAACAAACTGTGGTGGAAGAAACTTCTAGAGTGGACAACACATTAGTTGTTGGGGATGATCCTACTGTAGAGGACCCTGGATCTTCAGAGAAATTATATCAAGGCATGTCAGCTGACACTCCACAAAATGGTGATAGCAAAATCTCTAAAAATCAGTTAAGTGGGTCAGGATCTTTATCTCCAAAAGATGTTCAAAACCATCCCGAGAACCTTGAAATCACAAATGAAGAGCCAGTTCCCGAAAAAGAAGAGTTTCCTCCATCTCCCTCCGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGCGTTTGGAAGGGAACTGTATGTGAGAGGTCTCATCTCTTTCGCATTAAATACTATGGCAGCTTTGATAAACCATTGGGTCGATTTCTGCGGGACCATTTATTTGATCAGAGTTATCGATGCCATTCTTGTGAAATGCCATCAGAAGCACATGTGCATTGCTATACTCATCGACAGGGAACACTTACCATATCCGTCAAGAAACTACCAGAAATTATCCTACCTGGTGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAACGGCTTTCCTCCTGCTACACAGAGAATAATAATGTCTGATGCTGCTTGGGGTTTATCACTTGGGAAGTTTTTGGAGCTCAGTTTCTCAAACCACGCTGCAGCCAGCAGGGTGGCCAGCTGTGGTCATTCTTTACACAGAGATTGTCTTCGTTTTTATGGATTTGGAAGAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGGAATCAGGATTGGATACAACAAGAATCAGATGAGGTGGTCAATCGGGCAGAGCTTTTATTCTCTGAGGTCCTCAATGGTCTTAGTCAAATTGGAGAGCAAAGATCTAATGCACTCCAAGTCAGTAATGGCCATAAATCACCTGAATTAAGACGCCAAGTTGCTGAACTAGAGGGGATGTTGCAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAACCTGGGATTGATGTTCTGGAAATTAATCGATTGTGGAGGCAGTTACTTTTTCAATCATATATGTGGGACCACCGTCTTATTTATGCTGCCAACCTAGTCAATTCCAACTATGAATCTGGTTCAAGCAGTCCAATTTCAGAGGATAAGGAGAAACCTACTGATGAAAATCAGATGAGCATTAACTCTATTCATGGTGATCCAAAGCTTAACGGTAGCCCCAGCCATGGAGGAGGAAGTGTAGTAGTTGATGGCAAAATTTCACATGATGCATCGCATCAAGAAATTGACATGGTCAAAAATAAAAATCTTGAGAAAGATGACGAATCTGATCTTCCAAACAGCAAAAGCATAAATGATCAATCCAACCTTTTAGAACCTGAATTGGGTGTTGGCAGAGCTCTCTCTGATGGACCGTTTCCTGTCATTCCTAGTTTGTCTGAAACACTTGATGCAAAATGGACTGGTGAAAACCACTCAGGATATGGAATTCAAAAGGATAACAGTTCTGTAAATCCTGATATACTTATGGCAGATGCTTTGACGACCAGTGCACAAAAAGAAACATATTATCTAGGGGATCGTACAGAAGATCAAAATGGTTCCAAGAGTTTCTATTCTTCTTTTAAAGGTCATGATAATATGGAAGACTCTTCAAACTGGTTAGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAACAGGAACCTTTTTGCTAGTACACAGAAGTTTGATACCCTAGTTGACTACAATCCTGTTTATGTGTCATCTTTCCGGAAGCAAGAACTCCAGGGTGGGGCAAGGCTGCTTCTACCAATTGGTGTCAATGACACTGTAATTCCAGTATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCACCAGAATATCATTTCCAATTAAATGATGAAGGAGAAAGGCCAAGAGAAGGAAATGAGTTCACTTCATCATATTTTTCTGACTCAGGCACCTTGCAGTCATTCTCATCTGTTGACGAAACAGCTTTTGATTCTCAAAAAAGTTTTGGATCGATAGAGGAAATGATATTTTCCATGTCTGGGTCTCGTAATTCATCAATATTGGACCCAATGTTATATACTAAGGCTATGCATGCTAGAGTTTCCTTTGGAGTAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAAGCGATTTGAAGCCTTAAGAAGGGTCTGTTGTCCTTCAGAGCTAGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACTTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAGCTTGAGTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGCACTGGAAGTCCGACTTGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGGACTGTGACACGACTTTATGATCTTAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACCGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATTTTCGTGGGAAACAAAGCGAAAAGATTGTTAGAGAGAGCTGTCTGGAATGACACTGGTTTTCTTGCTTCAGTTGCTGTGATGGACTATTCTTTACTGGTTGGAGTGGATGAAGAGAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTATACCTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGCATCCTTGGAGGACCAAAGAACACATCTCCTACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCTGATCAGTGGTCTCCTTCTATTATTCCTAGTCATTCTCAGTCTGATTTTGGTGAAGACAACACACAACCTAGGACTCCAGCTGAATGA 5478 0.4171 MDAVDKTFSELVSIVKSWIPWRSEPVNVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPFSNQRNSWDELEKIRVCNYCYKQWEQGIVAFDNSIPVSNLDNSASGSTSSVASSKTSATANSSNITLCSMPYSVGSYQPMQQGSVLNLHKSPVKGKDPDTDREGLSALGGRSDLVADLGDPLPKQYRFSINRYDDDEDEYGVYRSDSDMRDYPQVNNYYVQAELHGIGNIDGSQKVDLDGENTNAKLPSNYSFDTQDLEGAQVIAKNEDEPYICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDEQEAILFDDDDDHDGNATGEWGYLRSSSSFGSGEYRHRDRSSEEHKNVMKNVVDGHFRALVSQLLQVENLPVEDNDKNSWLEIVTSLSWEAATLLKPDMSKGGGMDPAGYVKVKCIACGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERVARCTGTQIVPSIDHLSSQKLGYCETFHVEKFLEDLNSAGQGGKKTMKTLMFFEGCPKPLGFTILLKGADKDELKKVKHVVQYGVFAAYHLALETSFLADEGVSLPEIPLNSLALPDKSSSIQRSISTVPGFGIADNEKPQGLEPYTEPQRTKSLTAADLASSTCGTGPCLSNGASQSMALGSSLNYSTALYSSIVASGNSIPESHHNKLLSCTSRDTNEMNSKQTVVEETSRVDNTLVVGDDPTVEDPGSSEKLYQGMSADTPQNGDSKISKNQLSGSGSLSPKDVQNHPENLEITNEEPVPEKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIIMSDAAWGLSLGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPHTLIFDYGNQDWIQQESDEVVNRAELLFSEVLNGLSQIGEQRSNALQVSNGHKSPELRRQVAELEGMLQKEKLEFEETLQKILNQEKRNGQPGIDVLEINRLWRQLLFQSYMWDHRLIYAANLVNSNYESGSSSPISEDKEKPTDENQMSINSIHGDPKLNGSPSHGGGSVVVDGKISHDASHQEIDMVKNKNLEKDDESDLPNSKSINDQSNLLEPELGVGRALSDGPFPVIPSLSETLDAKWTGENHSGYGIQKDNSSVNPDILMADALTTSAQKETYYLGDRTEDQNGSKSFYSSFKGHDNMEDSSNWLGMPFLNFYRQFNRNLFASTQKFDTLVDYNPVYVSSFRKQELQGGARLLLPIGVNDTVIPVYDDEPSSIIAYALMSPEYHFQLNDEGERPREGNEFTSSYFSDSGTLQSFSSVDETAFDSQKSFGSIEEMIFSMSGSRNSSILDPMLYTKAMHARVSFGVDGPLGKVKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVAVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPSIIPSHSQSDFGEDNTQPRTPAE 1825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00427 1825 Gene3D GroEL 453 625 IPR027409 -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 1181 1226 - -
Gma07g00427 1825 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1815 - -
Gma07g00427 1825 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1569 1735 IPR002498 GO:0016307|GO:0046488
Gma07g00427 1825 SMART PIPK_2 1503 1794 IPR002498 GO:0016307|GO:0046488
Gma07g00427 1825 SUPERFAMILY SAICAR synthase-like 1521 1793 - -
Gma07g00427 1825 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Gma07g00427 1825 Gene3D - 1652 1794 - -
Gma07g00427 1825 Pfam TCP-1/cpn60 chaperonin family 407 647 IPR002423 GO:0005524
Gma07g00427 1825 MobiDBLite consensus disorder prediction 1238 1263 - -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 854 868 - -
Gma07g00427 1825 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 107 IPR013083 -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 769 871 - -
Gma07g00427 1825 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 813 852 - -
Gma07g00427 1825 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Gma07g00427 1825 CDD FYVE_PIKfyve_Fab1 32 99 - -
Gma07g00427 1825 SUPERFAMILY GroEL apical domain-like 453 625 IPR027409 -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 1805 1825 - -
Gma07g00427 1825 CDD Fab1_TCP 388 659 - -
Gma07g00427 1825 CDD PIPKc_PIKfyve 1530 1793 IPR044769 GO:0000285
Gma07g00427 1825 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1469 1650 IPR027484 -
Gma07g00427 1825 SMART fyve_4 28 103 IPR000306 GO:0046872
Gma07g00427 1825 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1469 1793 IPR002498 GO:0016307|GO:0046488
Gma07g00427 1825 Coils Coil 1106 1140 - -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 769 790 - -
Gma07g00427 1825 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1815 - -
Gma07g00427 1825 MobiDBLite consensus disorder prediction 1238 1256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00427 Gma-Chr7 3870785 3880464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00427 2 1825 EF-hand Containing Proteins AT3G14270 60.194 0.0 2095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00427 K00921 - gmx:100819364 3623.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00427 07 3870785 3880464 Gma07g00427 07 3870785 3880464 ECH
Gma07g00427 07 3870785 3880464 Gma16g00120 16 1181048 1190850 GST