Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00065 ATGAAGATGATTTACGTTCTTTTCCTCTTTGCTCTTCTCTCTTTCACTTCTCATGCTGCTGTCAATGATTTCTGTGTAGCAGACCTAAAAGCTGGAAACACCACAAACACTTTCAATGCTGCATTAACCTCAGCATTCGTTGCTGATTTTCCAGGTGTGAATGGTCTTGGTGTATCTGCAGCACGGTTAGACATAGCAAAAGGTGGATCCATCCCAATGCACACACACCTTGCTGCCACTGAACTTCTGATAATGGTGCAAGGACAAATCAGTGCTGGTTTTATGACACCAACTGCACTTTATACCAAGACACTAAAACCGGGTGATATTATGGTTTTCCCACAAGGACAGTTGCATTTTCAGGTGAATTCTGGGAACGGAAAAACCACTGCTTTTCTTGCATTCAGCGGTGCAAACCCTGAAGCACAACTACTTGACCTTCTGTTATTTGGCAACAGCTTGCCTTCTGAGTTGGTTGCACAAACTACCTTCCTTGAGGTTGAACAAGTGAAGAAGGTTAAGGCTCGTTTTGGTGGAAGAGGGTAG 546 0.4377 MKMIYVLFLFALLSFTSHAAVNDFCVADLKAGNTTNTFNAALTSAFVADFPGVNGLGVSAARLDIAKGGSIPMHTHLAATELLIMVQGQISAGFMTPTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKTTAFLAFSGANPEAQLLDLLLFGNSLPSELVAQTTFLEVEQVKKVKARFGGRG 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00065 181 PRINTS Germin signature 74 94 IPR001929 GO:0030145
Gma16g00065 181 PRINTS Germin signature 103 123 IPR001929 GO:0030145
Gma16g00065 181 PRINTS Germin signature 136 151 IPR001929 GO:0030145
Gma16g00065 181 SUPERFAMILY RmlC-like cupins 41 178 IPR011051 -
Gma16g00065 181 Pfam Cupin 30 171 IPR006045 -
Gma16g00065 181 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 30 177 - -
Gma16g00065 181 PANTHER GERMIN-LIKE PROTEIN 30 177 - -
Gma16g00065 181 CDD cupin_OxOx 17 177 - -
Gma16g00065 181 Gene3D Jelly Rolls 17 180 IPR014710 -
Gma16g00065 181 SMART Cupin_1_3 27 171 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00065 Gma-Chr16 659068 659693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00065 18 181 Miscellaneous Gene Families AT1G72610 49.741 5.15e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00065 - - gmx:100818105 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00364 07 3261965 3262822 Gma16g00065 16 659068 659693 GST