Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00364 ATGCCAATTCCACATTACCTTCACACCAAATCCATTCATCCAAGTTCAAAGATGAAGATGATCCACGTTCTTTTCCTCTTTGCTCTCGTCTCGTTCACTTCCCATGCTTCTGTCAATGATTTCTGTGTAGCAGACCTAAAAGGTCCAGATAGCCCTTCAGGCTATCAGTGCAAGCCACCTAACACAGTCACAGTGGATGACTTTGTGTTCTCTGGCTTTGTAGCTGGAAACACCACAAACACTTTCAATGCTGCATTAACCTCCGCATTTGTTACTGATTTTCCAGGTGTGAATGGTCTTGGTGTATCTGTGGCACGGTTAGACATAGCCAAAGGTGGATCAATCCCAATGCACACACACCCTGCTGCCACTGAACTTCTAATAATGGTGGAAGGTCAAATCACTGCTGGTTTTATGACCCCAACTGCACTTTATACCAAGACACTGAAACCTGGAGATATTATGGTTTTTCCACAAGGACAGTTGCATTTTCAGGTTAATTCTGGAAACGGAAAAGCCACTGCTTTTCTGGCATTCAGTAGTGCAAACCCTGGAGCACAACTACTTGACCTTCTGTTATTTGGCAACACCTTGCCTTCTGACTTGGTTGCACAGACTACCTTCCTTGATGTTGCACAAGTCAAGAAGGTTAAGGCTCGTTTTGGTGGCAGAGGCTAG 678 0.4469 MPIPHYLHTKSIHPSSKMKMIHVLFLFALVSFTSHASVNDFCVADLKGPDSPSGYQCKPPNTVTVDDFVFSGFVAGNTTNTFNAALTSAFVTDFPGVNGLGVSVARLDIAKGGSIPMHTHPAATELLIMVEGQITAGFMTPTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANPGAQLLDLLLFGNTLPSDLVAQTTFLDVAQVKKVKARFGGRG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00364 225 SUPERFAMILY RmlC-like cupins 40 222 IPR011051 -
Gma07g00364 225 ProSitePatterns Germin family signature. 113 126 IPR019780 GO:0030145
Gma07g00364 225 PRINTS Germin signature 118 138 IPR001929 GO:0030145
Gma07g00364 225 PRINTS Germin signature 147 167 IPR001929 GO:0030145
Gma07g00364 225 PRINTS Germin signature 180 195 IPR001929 GO:0030145
Gma07g00364 225 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 24 221 - -
Gma07g00364 225 Gene3D Jelly Rolls 35 224 IPR014710 -
Gma07g00364 225 SMART Cupin_1_3 71 215 IPR006045 -
Gma07g00364 225 CDD cupin_OxOx 34 221 - -
Gma07g00364 225 Pfam Cupin 74 215 IPR006045 -
Gma07g00364 225 PANTHER GERMIN-LIKE PROTEIN 24 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00364 Gma-Chr7 3261965 3262822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00364 18 223 Miscellaneous Gene Families AT5G20630 57.895 4.38e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00364 - - gmx:100818105 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00364 07 3261965 3262822 Gma16g00065 16 659068 659693 GST