Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01881 ATGGCGAAATTGAAGATAGGAGGGACATGGGCGGGGGTTCTGGAAGAGGTGGACCTCCAAGCCTGGACCCTCGCCACGCTCCGCGACCACGTCGCCGCCCGATCGAACACTCCCTCCGACTCCATCAACCTCATCTGCGCCGGCAAAATTCTCAAAGACGACACCGTTCCGCCCCAAACCCTCGCCCAACTCGGCGTCAAAAGCAACGCCAAGATCCTCGCCACTCGCGCCTCCACTCCTCAACAAGGACACTCCTTCCTCGCCCAGGAAGAACGCTCCTCCAGACTCGCGCGTATCAGGGCGGCTGCGAATGCAATGGCAGAAAGGCATGCGGATGGTGCGTTGCCGGTTGAAGACTTCAATATTGAAGTTGAGGATCAGAATGGACAGAAAGTGCGTTTAGGCTCTGAGACTGATCAGAGGGCAGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGCGACTTATCAGACAGGGGAATTACAAAGATGCCCTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATCCAAAAGTCATTGAGCTCATTGACAATGTTCCGATACTACAAATAGACATGGTATGGTGCTATTTTATGATACGAGACATCAAATGGCTCTCGGATGCAGGGAAGCGTCTTGAAATGGCCAGGGAAGGTATTGAACGTGCTCATGGAAAGGATTCTTTTCGCCTCAGGCTCTTGCAAGGAGGTCGCTATCCAGAACTTGCATTACATTTGAGACTAGAGCTACTTGAAGGGGTGGTGGCGTATCATACTGGCCAATTTGAGAAATCCAAACAAACATTAGCCTCAGCAAGGACAAAGTTTATCCAGCTGCAAGTGCCGGATGAAGCCTTATCACTTGTTATGAGCATGGGTTTTGCTGAACGTGATGCAAAGAGAGCATTGAGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAGACAAAGAAACTGCGAAAGAGGGAGGAGGATATTCGGAGGAGAAATGAAATTAAGGAACAAAAGCGATATGGGATGACACCCTTAAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTGACAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGACACTCAGAAAGCATTGGATGATTTGACAAATCCAGAAACTAATTCTGCTTTACAGGTCAATATCGAGTCCAGGAAAAGGAAGAGACAGAAAGCAGCACGAGATTCTGAAATTGAAAAAGTTGTGCAAATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCCGGAGGTAGTTTAGATGAAGTATTGCAAAGACTGACAGCACAACCTGGGACTGACCCCACGCAACCTCGAGAAAATTCAGCTTCTGCTTCCCATGGTGGTGCAAGTTCATCTGCTCCTTTGCCAGACAATGTTGATGCTGATTTAGCGATGTATAAGGTTGAAGATCACAGTAAAACAGAACAACGAGATGTAGAGATGGAAGATGAGCTCTCTGCAGATATAGCGAAAGCAGATGCCTTGGCTGATTATGACATCGAAGTTACTGTAGAAGGGGAAGCCATAACTGAGTACCTTGCCCTGGTTGAGTCTGCAAGCTGTCGTGGGGAAACTGTTCCTTCCCAGTAA 1668 0.4796 MAKLKIGGTWAGVLEEVDLQAWTLATLRDHVAARSNTPSDSINLICAGKILKDDTVPPQTLAQLGVKSNAKILATRASTPQQGHSFLAQEERSSRLARIRAAANAMAERHADGALPVEDFNIEVEDQNGQKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLSMGEESFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIKWLSDAGKRLEMAREGIERAHGKDSFRLRLLQGGRYPELALHLRLELLEGVVAYHTGQFEKSKQTLASARTKFIQLQVPDEALSLVMSMGFAERDAKRALRMNNQDVGGAIDFLAEEKTKKLRKREEDIRRRNEIKEQKRYGMTPLKKAVDLERLKELVSIGFDKELAAEALRRNENDTQKALDDLTNPETNSALQVNIESRKRKRQKAARDSEIEKVVQMGFERSRVVAAFEAGGSLDEVLQRLTAQPGTDPTQPRENSASASHGGASSSAPLPDNVDADLAMYKVEDHSKTEQRDVEMEDELSADIAKADALADYDIEVTVEGEAITEYLALVESASCRGETVPSQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01881 555 MobiDBLite consensus disorder prediction 455 511 - -
Gma15g01881 555 Gene3D - 15 82 - -
Gma15g01881 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Gma15g01881 555 MobiDBLite consensus disorder prediction 391 405 - -
Gma15g01881 555 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 545 IPR039749 -
Gma15g01881 555 ProSiteProfiles Ubiquitin domain profile. 23 72 IPR000626 GO:0005515
Gma15g01881 555 Gene3D - 359 396 - -
Gma15g01881 555 Gene3D - 286 325 - -
Gma15g01881 555 SUPERFAMILY UBA-like 259 324 IPR009060 GO:0005515
Gma15g01881 555 CDD UBA 362 391 - -
Gma15g01881 555 MobiDBLite consensus disorder prediction 406 421 - -
Gma15g01881 555 MobiDBLite consensus disorder prediction 455 478 - -
Gma15g01881 555 SUPERFAMILY UBA-like 354 396 IPR009060 GO:0005515
Gma15g01881 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Gma15g01881 555 MobiDBLite consensus disorder prediction 388 421 - -
Gma15g01881 555 MobiDBLite consensus disorder prediction 489 511 - -
Gma15g01881 555 SUPERFAMILY Ubiquitin-like 22 76 IPR029071 -
Gma15g01881 555 SMART uba_6 358 395 IPR015940 -
Gma15g01881 555 SMART uba_6 418 454 IPR015940 -
Gma15g01881 555 SMART uba_6 286 323 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01881 Gma-Chr15 24062255 24067543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01881 - - gmx:100804062 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01881 15 24062255 24067543 Gma15g01881 15 24062255 24067543 ECH
Gma15g01881 15 24062255 24067543 Gma09g00851 09 12550068 12560241 GST