Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00851 ATGGCGAGATTGAAGATAGGAGGGACATGGGCAGGGGTGCTGGAAGAGGTGGACCTCCAGGCGTGGACCCTGGCTACGCTCCGCGACCTCGTCGCCGCCCGATCGAACTCCCCCTCCTCCGACTCCATCAACCTCATCTGCGCCGGCAAGATTCTCAAAGACGACGCCGTTCCGCCCCAAACTCTTGCCCAACTCGGCGTCAAGAACAATGCGAAGATCCTCGCCACGCGCACCTCCACTCCTCAGCAAGGACACTCCTTCCTCGCCCAGGAAGAACGCTCCTCCAGACTCGCGCGTATAAGGGCGGCTGCGAATGCGATGGCGGACAGGCATGCGGATGGGGCATTGCCAGTTGAAGACTTCAATATTGAAGTTGAGGATCAGAGTGGACAGAAAGTGAGATTAGGCTCTGAGACTGATCAGAGGGCAGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGCGACTTATCAGACAGGGGAATTACAAAGATGCACTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATCCAAAAGTCATTGAGCTCATTGACAATGTTCCAATACTACAAATAGACATGGTATGGTGCTATTTTATGATACGAGACATCAGATGGCTCTCAGATGCAGGAAAGCGTCTTGAAATGGCTCGGGAAGGTATTGAACGTGCTCATGGAAAGGATTCTTTTCGCCTCAGACTCTTACAAGTAGGTCGATATCCAGAACTCGCATTGCATTTGAGACTAGAGCTACTTGAAGGGGTAGTGGCATATCATATTGGCCAATTGGAGAAATCCAAAAAAACATTAGCCTCAGCAAGGACAAAGTTTATCCAGCTGCAAGTGCCAGATGAAGCCTTATCACTTGTTATGAGCATGGGCTTTGTTGAACGCGATGCAAAGCGAGCATTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAGGCAAAGAAATTGCAAAAGAGGGAGGAAGATATTCGGAGGAGAAATGAAATTAAGGAACAAAAGCAGTATGGGATGACACCCTTAAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGATTTGACAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGACACTCAGAAAGCATTGGATGATTTGACGAATCCAGAAACTAATTCTGCTTTGCAGGTCAATATCGAGTCAAGGAAAAGGAAGAGACAGAAACAAGCACGAGATTCTGAAATTAGAAACGTTGTGCAAATGGGTTTCGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCCGGAGGTAGTTTAGAAGAAGTATTGCAAAGACTAACAGCACAACCTGGGACTGACCCCACACAACCTCAAGAAAATTCAGCTTCTGCTTCCCATGGTGGTGCAAGTTCATCTGCTCCTTTGCCAGACAATGTTGATTCTGATATAGCGATGAACGAGGTTGAAGATCCCAGTATAACAGAACAACGCGATGTAGAGATGGAAGATGAGCTCTCTGCAGATATAGCGAAAGCAGATGCCTTGGCTGATTATGACATCGAAGTTAACGTCGAAGGGGAAGCCATAACCGAGTACCTTTCCCTGGTTGAGTCGGCAGGCAGTTGTGGGAAAACTGCTCCCTCCCACCAACCTAGCCTTCCCTTTGCATACTTCTTTGCCTTGCACCATCACATCTTCTTCCCCCAAGTTCATGGATTCCATTTTCTCTATTGTGCATGCAACCTAATGACATACAACAACATTGGCGAAACCCTTACCATCGCCACCGCCAATCCTGTGTTGCCTCCATCGTCAAACCTCCCCCAGTTAACGGAGTTTCCGAAGCTAGAGCACCATTTCCTGAGGGTCCTTTTTGAGCACTACAAGAAAACCCTCAGTGCCAACCTCTATGTTGTTGAGAAAGAGATGTTTGTTGTCATCTTCAACATCATCGAAGTTGTCACCATTAGGGTGCTCATGATTTAA 2007 0.4758 MARLKIGGTWAGVLEEVDLQAWTLATLRDLVAARSNSPSSDSINLICAGKILKDDAVPPQTLAQLGVKNNAKILATRTSTPQQGHSFLAQEERSSRLARIRAAANAMADRHADGALPVEDFNIEVEDQSGQKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLSMGEESFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEMAREGIERAHGKDSFRLRLLQVGRYPELALHLRLELLEGVVAYHIGQLEKSKKTLASARTKFIQLQVPDEALSLVMSMGFVERDAKRALRMNNQDVGGAIDFLAEEKAKKLQKREEDIRRRNEIKEQKQYGMTPLKKAVDLERLKELVSIGFDKELAAEALRRNENDTQKALDDLTNPETNSALQVNIESRKRKRQKQARDSEIRNVVQMGFERSRVVAAFEAGGSLEEVLQRLTAQPGTDPTQPQENSASASHGGASSSAPLPDNVDSDIAMNEVEDPSITEQRDVEMEDELSADIAKADALADYDIEVNVEGEAITEYLSLVESAGSCGKTAPSHQPSLPFAYFFALHHHIFFPQVHGFHFLYCACNLMTYNNIGETLTIATANPVLPPSSNLPQLTEFPKLEHHFLRVLFEHYKKTLSANLYVVEKEMFVVIFNIIEVVTIRVLMI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00851 668 MobiDBLite consensus disorder prediction 455 484 - -
Gma09g00851 668 Coils Coil 327 347 - -
Gma09g00851 668 MobiDBLite consensus disorder prediction 407 421 - -
Gma09g00851 668 SUPERFAMILY UBA-like 279 325 IPR009060 GO:0005515
Gma09g00851 668 Gene3D - 287 326 - -
Gma09g00851 668 Gene3D - 360 397 - -
Gma09g00851 668 ProSiteProfiles Ubiquitin domain profile. 23 73 IPR000626 GO:0005515
Gma09g00851 668 SUPERFAMILY UBA-like 355 397 IPR009060 GO:0005515
Gma09g00851 668 Gene3D - 15 85 - -
Gma09g00851 668 SUPERFAMILY Ubiquitin-like 22 79 IPR029071 -
Gma09g00851 668 CDD UBA 363 392 - -
Gma09g00851 668 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 285 325 IPR015940 -
Gma09g00851 668 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 546 IPR039749 -
Gma09g00851 668 MobiDBLite consensus disorder prediction 389 421 - -
Gma09g00851 668 SMART uba_6 287 324 IPR015940 -
Gma09g00851 668 SMART uba_6 359 396 IPR015940 -
Gma09g00851 668 SMART uba_6 419 455 IPR015940 -
Gma09g00851 668 MobiDBLite consensus disorder prediction 392 406 - -
Gma09g00851 668 MobiDBLite consensus disorder prediction 455 488 - -
Gma09g00851 668 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 357 397 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00851 Gma-Chr9 12550068 12560241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00851 - - gmx:100792972 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00851 09 12550068 12560241 Gma09g00851 09 12550068 12560241 ECH
Gma15g01881 15 24062255 24067543 Gma09g00851 09 12550068 12560241 GST