Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01610 ATGGAGTGCGTTGCAGCGAGGAACTTGGCGGCAATGGCGTTTTGCGTGAGTCCTTCGTCGTCGAGGTTGAGGTTGCGACGGAAGAAGCTGTGGAGAAGACGAGCCGCGTCGTCCTCGTCGTCGTGCGGCGGCGGCCGCGGCGTGCGGTGGCTGAAGGTGGAGGCAAAGGCGGGGAGCGAGAGCTGCGTTGCGACCAAAGAGGACTTCGCCGATGAGGAAGATTATGTGAAGGCCGGTGGCTCCGAACTCGTTTTCGTACAAATGCAACAGAAGAAAGCCATGGAAATGCAGTCCAAGCTCGCGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCTGAATCAGCCAAGTTAGGACTGAAAGTTGGGCTTATTGGTCCGGATCTCCCTTTTACAAACAATTATGGTGTGTGGGAGGACGAATTTAAAGATCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAGGATACCATTGTCTTTCTTGACAATAAGGACCCCATTTTTATTGGTCGTTCCTATGGACGTGCCAGTCGGCATCTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTATTATTGAGGCAACCAATGGTCATAGTCATGTTGTCTGTGAATATGACATTGTAGTTCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCAGGGAAACTGCTGCAATATGAGGTCGGGGGTCCAAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAATGTCCAGAAGCAAATTTTCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTAGCGTCAAAAGATGCCATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCAAGATTAAATACAATGGGGATCAGAATTACGAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCGTTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGGTACTCTGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATTGCTACTATTTTGAAAGATGGCCATGCCAAGGACATTATTACGCAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACCCTTTGGCCTCAAGAAAGGAAACGCCAGAGAGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCAGCTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTCTCATCTACAGATCTTGTATTATTTGCATTCTACATGTTCATAATAGCACCAAATAACTTGAGAATGGGTCTAGTCAGACATCTGCTTTCGGATCCTACTGGTGCAACCATGATAAAGACTTACTTAACGATATAA 1602 0.4532 MECVAARNLAAMAFCVSPSSSRLRLRRKKLWRRRAASSSSSCGGGRGVRWLKVEAKAGSESCVATKEDFADEEDYVKAGGSELVFVQMQQKKAMEMQSKLADKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVFLDNKDPIFIGRSYGRASRHLLHEELLRRCVESGVSYLSSRVESIIEATNGHSHVVCEYDIVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCPEANFPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMGLVRHLLSDPTGATMIKTYLTI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01610 533 SUPERFAMILY FAD/NAD(P)-binding domain 111 506 IPR036188 -
Gma15g01610 533 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 7 492 - -
Gma15g01610 533 PANTHER - 7 492 - -
Gma15g01610 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 113 135 - -
Gma15g01610 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 243 252 - -
Gma15g01610 533 Pfam Lycopene cyclase protein 113 510 - -
Gma15g01610 533 Gene3D - 112 472 IPR036188 -
Gma15g01610 533 TIGRFAM carotene-cycl: lycopene cyclase family protein 113 513 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01610 Gma-Chr15 15907255 15915113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01610 K06444 - gmx:100788180 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01610 15 15907255 15915113 Gma15g01610 15 15907255 15915113 ECH
Gma15g01610 15 15907255 15915113 Gma09g00598 09 6619493 6630268 GST