Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00598 ATGGAGTGCGTTGCGGCGAGGAACTTGGCGGCAATGGCGTTCTGCGTGAGTCCTTTGTCGTCGAGGTTGAGGCTGCGGAGGAAGAAGCTGTGGAGAAGACGAACCGCGTCGTCGTCGTCGTCGTGCGGCGGCCGCGGCGTGCGGTGTCTGAAGGTGGAGGCGAAGGCCGGGAGCGAGAGCTGCGTGGCGACGAAAGAGGACTTCGCCGACGAGGAGGATTACGTGAAGGCCGGTGGCTCCGAACTCGTTTTCGTCCAAATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTCGCGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCAGAATCAGCCAAGTTAGGACTGAAAGTTGGGCTTATTGGTCCGGATCTCCCTTTTACAAACAATTATGGTGTGTGGGAGGACGAATTTAAAGATCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAGGATACCATTGTCTATCTCGACAATAAGGACCCCATTTTTATTGGTCGTTCCTATGGACGTGTCAGTCGGCATCTGCTTCATGAGGAGTTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTGTTATTGAGACGAGTAATGGTCATAGTCATGTTGTCTGTGAATATGACGTTGTAGTGCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCAGGGAAACTGTTGCAATATGAGGTCGGGGGTCCAAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAATGTCCAGAAGCAAATTATCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAAAGTGTTCTTTGAGGAAACCTGTTTAGCATCAAAAGATGCTATGCCATTTGATTTACTAAAGAAGAAGCTCTTTTCGAGATTAAATACAATGGGGATCAGAATTAAGAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCCTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCTACAGGGTACTCCGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATTGCTACTATTTTGAAAGATGGTCATGCCAAGGACATCATTACTCAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACACTTTGGCCTCAAGAACGGAAACGGCAGAGAGCATTCTTTCTTTTTGGATTAGCCCTAATTCTGCAGCTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCCCTCTCATCTACAGATCTTGTATTATTTGCATTCTACATGTTCATAATAGCACCAAATAACTTAAGAATGGGTCTAGTCAGACATCTACTTTCGGATCCTACTGGTGCAACTATGATAAAGACTTACTTAACGATATAG 1599 0.4547 MECVAARNLAAMAFCVSPLSSRLRLRRKKLWRRRTASSSSSCGGRGVRCLKVEAKAGSESCVATKEDFADEEDYVKAGGSELVFVQMQQNKAMEMQSKLADKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVESVIETSNGHSHVVCEYDVVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCPEANYPTFLYAMPMSRTKVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRIKKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMGLVRHLLSDPTGATMIKTYLTI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00598 532 TIGRFAM carotene-cycl: lycopene cyclase family protein 112 512 IPR010108 GO:0016117|GO:0016705
Gma09g00598 532 PANTHER - 7 491 - -
Gma09g00598 532 PRINTS Pyridine nucleotide disulphide reductase class-I signature 112 134 - -
Gma09g00598 532 PRINTS Pyridine nucleotide disulphide reductase class-I signature 242 251 - -
Gma09g00598 532 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 7 491 - -
Gma09g00598 532 SUPERFAMILY FAD/NAD(P)-binding domain 110 505 IPR036188 -
Gma09g00598 532 Pfam Lycopene cyclase protein 112 509 - -
Gma09g00598 532 Gene3D - 111 471 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00598 Gma-Chr9 6619493 6630268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00598 K06444 - gmx:100790686 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00598 09 6619493 6630268 Gma09g00598 09 6619493 6630268 ECH
Gma15g01610 15 15907255 15915113 Gma09g00598 09 6619493 6630268 GST