Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01470 ATGGTAATGAGAAGGCTGATATGCACCATCTTCCTTATCACCCTTCTCAACCCCTTCTTATGCTCGTGCTCCTTCTCCTCTCTCACTTCAGGGTGTGAACCATCACGCGTGTACCGTGTGACGTCTTATGGTGCAGATCCAATGGGTAATTCGGATAGCACTGAGGCACTCCTTGCAGCCATAGAAGGTGCAGCCAAGGGTCCTAACCTTGGAGGTGCTCAGATTAGTCTTGAGGGTGGAAGTTACTTGATCATCCGGTCACTGAAGTTGCTGGTGGCCGGGGTGGGGAACCTTATGATACATGGGGGGACTAAAAGAGCCTCAGATAATTATCCAGAAGACGGCTATATCATTGATTTGTCACCCTTTCTAATGGACGAAACAGACCTCTTGCTGGACTCAAACTACAGGGGAGGGGGCATTTCAGTCATAAACTCACTTAGGACTAGCATAGACAATTGTTACATCACACATTTCACCACCAATGGAATTTTAGTCCAAAGTGGCCATGAAACCTACATCAGAAACTCTTTCCTTGGCCGGCATATAATTGCTGGTGAGGACAAAAATGAGAGGGACTTCTCAGGCACAGGAATAAGCCTCCAGGGTAATGACAATGCTGTCACTGATGTTGCAATTCTCTCGGCTGCAATAGGATTAATGGTCACTGAAGACCCAGTTCAACTCCATATCTCTAGCAGTTTCTTCCTTGGTGATGCCAATATTGCCCCAAAGTCCAAGAATGGGGTTGTGAATGGTGTTGATATTGTTGATCAAGTTATTGTTGATAAAAACATTGCAAGGGGGATGAAGTTAACGGCCACAGTTGCAAAAATGTCTATGCAAGGGAATGGAACCTCTTGGAGTGTTGATTTTAACAATGTTTTGCTTTTCCCTAACCTTATAAAGAATGTTCAGTACTCTTTAAGCTCCAAAGGGAGCAGCTTCCCCAATGCTCTAAGGAATGTGTCTGAGAATTGTGTTGTGATTGAAACAAATGAAGCAGTAGTAGTGAATCAAAGTGCGTTAAGTTGA 1035 0.4444 MVMRRLICTIFLITLLNPFLCSCSFSSLTSGCEPSRVYRVTSYGADPMGNSDSTEALLAAIEGAAKGPNLGGAQISLEGGSYLIIRSLKLLVAGVGNLMIHGGTKRASDNYPEDGYIIDLSPFLMDETDLLLDSNYRGGGISVINSLRTSIDNCYITHFTTNGILVQSGHETYIRNSFLGRHIIAGEDKNERDFSGTGISLQGNDNAVTDVAILSAAIGLMVTEDPVQLHISSSFFLGDANIAPKSKNGVVNGVDIVDQVIVDKNIARGMKLTATVAKMSMQGNGTSWSVDFNNVLLFPNLIKNVQYSLSSKGSSFPNALRNVSENCVVIETNEAVVVNQSALS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01470 344 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Gma15g01470 344 Gene3D - 38 343 IPR012334 -
Gma15g01470 344 PANTHER POLYGALACTURONASE QRT3 257 338 - -
Gma15g01470 344 PANTHER POLYGALACTURONASE QRT3 257 338 IPR039279 GO:0004650
Gma15g01470 344 SUPERFAMILY Pectin lyase-like 3 312 IPR011050 -
Gma15g01470 344 PANTHER POLYGALACTURONASE QRT3 30 223 - -
Gma15g01470 344 PANTHER POLYGALACTURONASE QRT3 222 258 IPR039279 GO:0004650
Gma15g01470 344 PANTHER POLYGALACTURONASE QRT3 222 258 - -
Gma15g01470 344 PANTHER POLYGALACTURONASE QRT3 30 223 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01470 Gma-Chr15 13345058 13348477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01470 - - gmx:100804107 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01470 15 13345058 13348477 Gma09g00463 09 4528296 4530400 GST