Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00463 ATGGCAAGAAAAACTTTAGCTTGGTCCTTGCTTCTAGGGATGGCTTGTTCCATAGTTATTGGTTCATATGAGGAGAGCTTTCCTCCTAGGACATTTTCTAGTAACAACTATCATGAAGCAATACAAAGATTGCAGTCATTTAAGGCCTCTCTAACAAGACATGATTCCATTGCTTCAGCCTCATCTTCCTTATCAACCTTCTCAAGCCCTTCTTCTGCTCCTTCTCCTTCTCTCTCACTTCAGGGCGTGAACAATCCACGCGTGTACCGTGTGACGTCTTATGGTGCAGATCCAACGGGTAATTCGGATAGCACTGAAGCACTCCTTGCAGCCATAGAAGATGCAGCCAAGGGTCCTAGTGAAGGATATTTGATGGAAGGCATCAGAGACCTTGGAGGTGCTCAGATTAATCTTGAGGGTGGAAATTACTTGATCAGCCGGTCACTCAAGTTGCCGGTGGCCGGGGTGGGGAACCTTATGATACATGGAGGGACTATAAGAGCCTCAGATAATTTTCCAGAAGACGGCTATATCATTGATTTGTCACCCTCTTCTAATGGAAGAAACAGTTTACCATCCTACAATTTTGAGTTCATAACTCTCAAGGAACTCTTGCTGGACTCAAACTTCAGGGGTGGAGGCATTTCAGTCATAAACTCACTTAGGACTAACATAGACAATTGTTACATCACACATTTCACCACCAATGGAATTTTAGTCCAAAGTGGTCATGAAACATACATCAGGAACTCTTTCCTCGGCCAGCATATAACTGCTGGCGGCGACAAAAATGAGAGGAACTTCTCAGGCACTGGAATAACCCTCCAGGGTAATGACAATGCTGTCACTGATGTTGTAATTTTCTCTGCTGCTATAGGAATAATGGTTACTGGTCAAGCTAATGCCTTTTCTGGTGTACATTGTTACAATAAGGCCACTGGCTTTGGAGGCACTGGAATTTATTTGAAACTACCAGGTTTGACCCAAACCAGGATTGTGAATTCTTACATGGATTACACTAGTATTGTGGCGGAAGACCCGGTTCAACTCCATATCTCCAGCAGTTTCTTCCTTGGTGATGCCAATATTGTCCTAAAGTCCAAGAATGGAATTGTGAATGGTGTTGATATTGTTGATAACATGTTCTCAGGTTCAAATCAGGGTGTTGAAATTGTTCAGCTTGACCAGTCAAATAGTCCTTTCCAACAAATTGATCAAGTTATTGTTGATAGAAACATTGCAAGGGGGATGAAGTTAAAGGCCACAGTTGCCAAAATGTCTATGCAAGGGAATGGAACCTCTTGGAGTGTTGATTTTAACAATGTTTTGCTTTTTCCTAACCTCATAAAGAATGTTCAGTACTCTTTAAGCTCCACAGGCAGCACCTTCCCCAATCATGCTCTGAGGAATGTGTCCGAGAATCGTGTTGTGATTGAAACAAATGAAGCAGTGGCTGCCAATGTTTTTGTTACGGTGGATCAAAGTGCGTTAAGTTGA 1497 0.4269 MARKTLAWSLLLGMACSIVIGSYEESFPPRTFSSNNYHEAIQRLQSFKASLTRHDSIASASSSLSTFSSPSSAPSPSLSLQGVNNPRVYRVTSYGADPTGNSDSTEALLAAIEDAAKGPSEGYLMEGIRDLGGAQINLEGGNYLISRSLKLPVAGVGNLMIHGGTIRASDNFPEDGYIIDLSPSSNGRNSLPSYNFEFITLKELLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITAGGDKNERNFSGTGITLQGNDNAVTDVVIFSAAIGIMVTGQANAFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKSKNGIVNGVDIVDNMFSGSNQGVEIVQLDQSNSPFQQIDQVIVDRNIARGMKLKATVAKMSMQGNGTSWSVDFNNVLLFPNLIKNVQYSLSSTGSTFPNHALRNVSENRVVIETNEAVAANVFVTVDQSALS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00463 498 PANTHER POLYGALACTURONASE QRT3 1 496 IPR039279 GO:0004650
Gma09g00463 498 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 496 - -
Gma09g00463 498 Gene3D - 89 498 IPR012334 -
Gma09g00463 498 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Gma09g00463 498 Pfam Pectate lyase superfamily protein 91 314 IPR024535 -
Gma09g00463 498 SUPERFAMILY Pectin lyase-like 87 472 IPR011050 -
Gma09g00463 498 SMART pbh1 277 298 IPR006626 -
Gma09g00463 498 SMART pbh1 156 181 IPR006626 -
Gma09g00463 498 SMART pbh1 220 242 IPR006626 -
Gma09g00463 498 SMART pbh1 372 393 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00463 Gma-Chr9 4528296 4530400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00463 - - gmx:100804107 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01470 15 13345058 13348477 Gma09g00463 09 4528296 4530400 GST