Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01340 ATGAGTCCAACATGGGTTTTTGTGTTAGGTATTATTGCAGCAATGTTGGTGGTTGTGAATGGACAATCATCAGTGAAGCCATTGGTGAAGACAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCTTATTGCTGCAATGAGACTATCTCCGATTACTTTCAGACATACCAGTTTGAGAACCTCTTCGCGAAGCGCAATTCGCCGGTGGCACATGCAGTCGGATTCTGGGACTACCGTTCTTTCATCACTGCTGCAGCACTGTATCAGCCTCTTGGCTTTGGCACCACTGGAGGAAAGACCAGTGGCCAGAAGGAGCTTGCTGCTTTCTTTGGCCATGTTGGCAGCAAGACCTCTTGTGGTTATGGGGTGGCTACAGGGGGACCCTTAGCCTGGGGCTTATGCTACAATAAGGAATTGAGTCCTGATAAATTCTACTGCGATGACTACTACAAATTAACCTACCCTTGTACTCCTGGTGCAGCATACTATGGCCGTGGTGCCATCCCACTTTACTGGAACTACAACTATGGAAAAGCTGGGGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAAAATGCCACCTTAGCCTTCCAGGCTGCACTCTGGCAGTGGATGAACCCACCAGAGAAGCACCTACCATCACCCCACGATGTCTTTGTTGGCAACTGGAAACCCACAAAAAATGACACATTGTCCAAAAGGGTGCCTGGATTTGGTGCCACAATAAACTTGCTCTATGGGGACCAAACTTGTGGCCAGGGATCAGATAATGAGGCCATGAACAACATCATTTCACACTATCTTTATTACCTTGATCTCATAGGTGTTGGCAGAGAAGAGGCAGGACCTAATGAAGTACTCTCATGTGCTGAACAAGCTGCTTTTAAGCCCCCTGGCTCACCATCTTCTGCCACAAATTGA 957 0.4796 MSPTWVFVLGIIAAMLVVVNGQSSVKPLVKTVKGKKVCDKGWECKGWSAYCCNETISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAALYQPLGFGTTGGKTSGQKELAAFFGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKFYCDDYYKLTYPCTPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAALWQWMNPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGSDNEAMNNIISHYLYYLDLIGVGREEAGPNEVLSCAEQAAFKPPGSPSSATN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01340 318 SUPERFAMILY Lysozyme-like 56 307 IPR023346 -
Gma15g01340 318 PANTHER - 8 310 - -
Gma15g01340 318 Pfam Chitinase class I 64 291 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma15g01340 318 CDD chitinase_GH19 64 301 - -
Gma15g01340 318 PIRSF Endochitinase 2 308 IPR016283 GO:0004568|GO:0005975
Gma15g01340 318 Gene3D Endochitinase, domain 2 144 203 - -
Gma15g01340 318 Gene3D - 64 307 - -
Gma15g01340 318 PANTHER CHITINASE-RELATED 8 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01340 Gma-Chr15 11928062 11930528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01340 23 307 Glycoside Hydrolase AT3G16920 81.754 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01340 - - gmx:100805300 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01340 15 11928062 11930528 Gma15g01340 15 11928062 11930528 ECH
Gma15g01340 15 11928062 11930528 Gma09g00346 09 3259267 3261474 GST