Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00346 ATGAGTCCAACATGGGTTTTTGTGTTAGGTGTTGCAGCAATGTTGGTGGTTGTGAGTGGACAATCATCAGTGAAGCCTTTGGTGAAGACAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAAGGTTGGTCTGCATATTGCTGCAATGAGACTATCTCCGACTACTTCCAGACATACCAGTTTGAGAACCTCTTCGCGAAGCGCAATTCGCCGGTGGCACATGCTGTTGGTTTCTGGGACTACCGTTCTTTCATCACCGCTGCTGCACTGTACCAGCCTCACGGCTTTGGCACCACTGGGGGAAAGACCAGTGGCCAGAAGGAACTTGCTGCTTTCTTTGGCCATGTTGGCAGCAAGACCTCTTGTGGTTATGGGGTGGCTACAGGGGGACCCTTAGCCTGGGGCTTATGCTACAGCAAGGAATTGAGTCCTGATAAATTCTACTGCGATGACTACTATAAATTAACCTACCCTTGCACTCCTGGCGCAGCATACTATGGCCGTGGTGCCATCCCACTTTACTGGAACTACAACTATGGAAAAGCCGGGGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAAAACGCCACTCTAGCCTTCCAGGCTGCACTCTGGCAGTGGATGACCCCACCAGAGAAGCACCTACCATCACCCCATGATGTCTTTGTTGGCAACTGGAAACCCACAAAAAATGACACATTGTCCAAAAGGGTACCCGGATTTGGTGCCACAATAAACTTGCTCTATGGGGATCAAACTTGTGGTCAGGGATCAGATAATGAGGCCATGAACAACATCATTTCACACTATCTTTATTATCTTGATCTCTTGGGTGTTGGCAGAGAAGAGGCAGGGCCTAATGAAGTTCTCTCCTGTGCTGAACAAGCTGCTTTTAAGCCCTCTGGCTCACCATCTTCTGCCACAAATTGA 954 0.4906 MSPTWVFVLGVAAMLVVVSGQSSVKPLVKTVKGKKVCDKGWECKGWSAYCCNETISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAALYQPHGFGTTGGKTSGQKELAAFFGHVGSKTSCGYGVATGGPLAWGLCYSKELSPDKFYCDDYYKLTYPCTPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAALWQWMTPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGSDNEAMNNIISHYLYYLDLLGVGREEAGPNEVLSCAEQAAFKPSGSPSSATN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00346 317 PANTHER - 11 309 - -
Gma09g00346 317 Gene3D - 63 306 - -
Gma09g00346 317 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Gma09g00346 317 Pfam Chitinase class I 63 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma09g00346 317 Gene3D Endochitinase, domain 2 143 202 - -
Gma09g00346 317 PIRSF Endochitinase 2 307 IPR016283 GO:0004568|GO:0005975
Gma09g00346 317 CDD chitinase_GH19 63 300 - -
Gma09g00346 317 PANTHER CHITINASE-RELATED 11 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00346 Gma-Chr9 3259267 3261474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00346 22 306 Glycoside Hydrolase AT3G16920 81.053 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00346 - - gmx:100809617 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00346 09 3259267 3261474 Gma09g00346 09 3259267 3261474 ECH
Gma15g01340 15 11928062 11930528 Gma09g00346 09 3259267 3261474 GST