Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01331 ATGAGAGTTTTGGAGAGTGCTTCTCCTGTTGAATCTGTCACTCATTTGAATATGGCTTTGCAGAAGTATGCTCCTTCTGGCAATGCACCTTCTGTTAATATGAAACATTTGAGCTTCTCCAGTAAGGTGCCTAAGAAAGCTGAGCTCGATGAAGCAAATCTGAATCACAACATGGATGTGGATATTGACCTTAGGGAAATTTATTTTCTCATTATGCACTTTCTTTCTGCTGGGCCATGTCATAAAACTCATTTACAGTTTTGGAATGAGCTTCTTGAGCATCAACTTTTGCCTAGAAGGTATCATGCTTGGTATTCAAGGACTGGGGCATGTAGTGGAGACAAAGATGATGATGGTCTATCATTCCCTTTAAATTACAATATGTTAGTAGAGAGGTATTCTCATATTGAAAAGGATCACTTGGTAAAGCTTTTGAAGCAATTGTTGTTAAATACAGCCTCCCCATCACTGGGTATGAATCTTGGAAATGCTCCAAATGCAGCTGATGTACCTACTCTTCTAGGAAGCGGTTCATTTTCACTTCTGAGCTATGATAGGGACAAAATGAAAGAAGTCAAATGGCCGCCTCCTCATATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCATGGGCTTAATTTGAGGGAAATTGGGGGTGGTTTCCCAAGACACCACCGTGCACCATCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCTACCATGGTGCAAAAGATGCAAAATATCAAGAGGTTAAGAGGACATCGCAATGCTGTCTATTGTGCTATATTTGATCGGGCAGGAAGATATGTGATTACTGGTTCCGATGACCGACTTGTAAAAATTTGGTCAATGGAAACTGCATATTGTTTGGCCAGTTGCCGTGGACATGATGGTGACATCACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGACTGTGTCATTCGAGTTTGGCGCTTGCCAGATGGCTTGCCAATATCAGTTTTGCGGGGACATACTGGAGCTGTTACAGCCATAGCATTTAGTCCCAGACCGAATGCTGTATACCAGCTTTTATCTTCCTCTGATGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCAGTCAAGTCCAAGATTATATGTTCCAAGGCCTTCTGATTCTGTAATTGGGAAGAGCAATGGCCCATCTTCAAGTACTGTACCACAGAGCCATCAGATTTTTTGCTGTGCATTTAATGCTAATGGAACTGTCTTTGTAACTGGTAGCTCTGACAATCTTGCTAGGGTGTGGAATGCTTGTAAACTTAGTATGGATGACACTGGCCAACCCGTTCATGAGATAGATGTGCTATCTGGGCATGAAAATGATGTGAATTATGTGCAATTCAGTGGATGTGCAGTAGCATCTCGGTTTTCCACAGCAGAAACTTGGAAGGAGGAAAATATTCCCAAATTTAAAAATTCCTGGTTGAATCATGACAACATAGTTACCTGCTCTCGAGATGGGAGTGCTATTATATGGATTCCTAAATCACGAAGGTCACATGGAAAAAGTGGTCGCTGGACCCGAGCATATCATCTGAGAGTTCCACCTCCACCTATGCCTCCTCAACCTCAAAGAGGTGGTCCTCGTCAGAGAATTCTACCAACTCCACGCGGTGTAAATATGATTGTTTGGAGCCTTGACAACCGCTTTGTCCTTGCAGCTATTATGGACTGCAGAATTTGTGTTTGGAATGCATCTGATGGAAGCTTAGTACACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTCAATCCCCGGATAGCTATGAGTGCTGGATATGATGGAAGAACCATCGTGTGGGATATATGGGAAGGCTTGCCTATCCGGACATATGAGATATCACGTTTCAAGTTGGTGGATGGAAAGTTTTCTCCGGATGGGACATCAATTATACTTTCGGATGATGTTGGTCAACTATATATATTAAGCACAGGCCAAGGCGAGTCTCAGAAAGATGCCAAATATGATCAGTTTTTTCTTGGTGATTATCGACCTCTGATTCAAGACACTCATGGTAACGTACTAGACCAGGAAACTCAAATTGTTCCATATCGACGGAGTCTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATTTCAGCAAAGACGATTAGGAGCATTAGGCTTTGAGTGGCGCCCATCATCACTAAGACTCGCTGTTGGTCCTGATTTCAGTCTGGACCCCGATTATCATATGCTTCCATTGGCAGACTTGGATTTGCTTACAGAACCACTGCCTGAGTTTATAGATGCTATGGAATGGGAACCTGAAGTTGAAGTGTTTAGTGATGATACAGATTCAGAATATAATGTCACTGAGGATTTCTCTTCTAAGGGTGAGAAAGGGTGTTCAAGCTCCAATGCTTCTGGTGATTCAGGGTGCAGCACAGATAACAGTGAAGGGGAGGACACTTGCATGGATAACATTCGTAGATCAAAGAGGAAAAAACAAAAGACTGAGACCGAGGTTATGACTTCTTCTGGGAGACGTGTGAAACGGAGGAATTTGGATGAGCGTGATGGCAATACTTTTGGCAGTAGCCGAAGTAGGAAGGGGAAAAGTGTCCAAAAAACATTAAGAAGGAAATCTTCTAAATCAAAATCTTCCCGACCTCAAAGGGCTGCTGCGCGCAATGCTCTGCATCTATTTTCCAAAATTACTGGTACACCAACAGATGGAGAAGAAGATAGTTTGGTCGGTGATTTTTCAGGTAGTGAATCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCTGATGGAACTTTACAGAATGAACAACTGAATTATTCTAAGGGAAAAGAAGTATCATATTATGAATCAGAGAACACCAAATCTCACGAGTTAACTGAAACTCATGTGAATTTGATGAACAAGAGGAGGTTGGTTCTCAAGTTGCCAAATCGTGATATATCCAAGTCCACAAATGAGTTTGACTACCAGACTGAGTTGGTTGGCTCATCATCAAAATCTTCTCAAGAAGCTACTGATTTTAATGGGAATGGACCAAGTTCTAAGGATTCAGGGTATTATTCTGGCAGTACAAGTTACCCCACAGTTGAAACAACAGATCAAGCAAAACTAGACCAGGTGACAGACCATGTAGACTTGCTGGGGAAAATTAGATGGGGAATGGTTAGGGCTCGTTCATCTAAACCTTTGAGAGTGGGAGAAGCTATGCCATCAGACACAAATCCCTACTCTGGAAAATGTCCTAATCATCTTGatgaaaaagaaaatgttggcagtgggcatgagaaagaggacaagaattttagtgcactaacccccgagttagaaatccaaaaggatgaccacaagttagataatagtttgacagagattaatGAAAATTGTGCTGGTACTACCTCACAGCCTTTTAATCCTACTGAGGATGGAAGAGAGATCACAGCTTCCAGCAATTGCAGGGACAAAGATGAATCACTAATTTCTGCTTATGTGATTCCTCAGGATATTGTTCCTGCTTCCATCAGCTATAGTGAGGTTGACCAACTACCTGAACTAAATATTGGTTTTCCTTCTGTTTTAACAAAATTAAGGTCTAAAAGGGGTTCAAGGGATCCTGAAAGTCCATCCAAGCATGAAACAAAATCTTCAGTGCTAAAGAATAGTGCATGTAGCACTAATGATAAGAATAATTTCAACAATGAACAGCATGTGGTTGTGGATGACCACAACAACACTAGAGTAGCATCTAATCAGGGAGAGAATGGATCTCAAGAAGTAGATCCTCAGATTAGGCAAAATAGTACTTCACAGGATTTGCCAGAACCACATTCACAAAGAGATAAAATGTATAAAGCTGTTTATAGAAGATCAAGATCTCATAGGGCTGTGACTAATTTAGCTGACAGTAGTGGCCAGGGAGAATTCAATTCAAATGGGAGAAACAGTAATTTCAATGCTACAGCAAACTTCAGCAATGGCACAAATGAAGCTATTCATACAAATGGATCCTTAGAGTTGGAACCAACCACTTGTGATCCAAATTATGAGCGGAATAATCTCAAAGTGCTGCAAGGACCTGGAAATTGTATGGTTAAAAGTCCACAGAATGTTTCCACAAGTGGAGGACAACTCACAGAAGAAGAAAGGGGTTCTAATTCAAAATTGACTGTTGGTTTAAGGTCCAATAGAAATCGGAGGTCTAGTTATAATATTTGTGAGACTAGTCCTGTAAATAAAAGGAAATCACTACAATCAGCTACCAGAGGATCATGGTTGCTGTTATCAACCCATGAGGAAGGATGCAGATATATTCCCCAACAGGGGGATGAAGTTGCATATTTGAGACAGGGGCACCAGGAGTATATAGATTATTGCCGTAAAAGAGAGTCAGGGCCTTGGGTATCACTTAAGGGACATATAAGAGCTGTAGAATATTGTAGAGTTCAAAGTCTAGAGTATTCCCATCTTCCAGGGTCCGGTGATAGCTGCTGCAAAATGAACCTTCAGTTTGTAGATCCTAATTCAAGTGTTGTTGGAAAATCTTTTAAATTAACCCTACCTGAAGTGACCAGTTTCCCAGATTTTCTTGTTGAAAGAACCAGGTTTGACGCTGCTATGCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAAGAATGAGGATAGTTCCTCTGGTAATTGGTGGGATGGTCGAATTCTGTGCATGAAAGCCAAGTCTTCTGAATTTCCAGACAGTCCATGGGAGAGTTATACTGTTCGTTACAAGAGTGACCTCACTGAAACACATTTGCATAGTCCTTGGGAGCTTTTTGATGCTGATACTGAATGGGAACAGCCTCACATTGATGATGACATGAGAAATAAACTGCAGTCCACACTCACCAAATTACAGCAGTCAGGCAACCCAGTCCAGGATCGTTATGGAGTGCATGAATTGAAGAAAATTTCAAATAAGTCCAAATTTATAAACAGGTTTCCTGTTCCTATATCTATTGAATTGATACAGTCAAGGTTGGAGAACAATTACTACCGTAGTTTGGAGGCACTGAAGCATGATGTGAGTATTCTACTGTCTAATGCCACCACTTTTCTTGAAAAGGATGCAGCGCTGTCAGCAAAAATCAAACGCCTTTCAGAATGGTTCACACGGGCATTATCATCTCTATAG 5244 0.4047 MRVLESASPVESVTHLNMALQKYAPSGNAPSVNMKHLSFSSKVPKKAELDEANLNHNMDVDIDLREIYFLIMHFLSAGPCHKTHLQFWNELLEHQLLPRRYHAWYSRTGACSGDKDDDGLSFPLNYNMLVERYSHIEKDHLVKLLKQLLLNTASPSLGMNLGNAPNAADVPTLLGSGSFSLLSYDRDKMKEVKWPPPHMRWPHMKANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRAGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSNGPSSSTVPQSHQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMDDTGQPVHEIDVLSGHENDVNYVQFSGCAVASRFSTAETWKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGLPIRTYEISRFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRSLQDLLCDSAMIPYPEPYQSEFQQRRLGALGFEWRPSSLRLAVGPDFSLDPDYHMLPLADLDLLTEPLPEFIDAMEWEPEVEVFSDDTDSEYNVTEDFSSKGEKGCSSSNASGDSGCSTDNSEGEDTCMDNIRRSKRKKQKTETEVMTSSGRRVKRRNLDERDGNTFGSSRSRKGKSVQKTLRRKSSKSKSSRPQRAAARNALHLFSKITGTPTDGEEDSLVGDFSGSESTLQESNIDSDESDGTLQNEQLNYSKGKEVSYYESENTKSHELTETHVNLMNKRRLVLKLPNRDISKSTNEFDYQTELVGSSSKSSQEATDFNGNGPSSKDSGYYSGSTSYPTVETTDQAKLDQVTDHVDLLGKIRWGMVRARSSKPLRVGEAMPSDTNPYSGKCPNHLDEKENVGSGHEKEDKNFSALTPELEIQKDDHKLDNSLTEINENCAGTTSQPFNPTEDGREITASSNCRDKDESLISAYVIPQDIVPASISYSEVDQLPELNIGFPSVLTKLRSKRGSRDPESPSKHETKSSVLKNSACSTNDKNNFNNEQHVVVDDHNNTRVASNQGENGSQEVDPQIRQNSTSQDLPEPHSQRDKMYKAVYRRSRSHRAVTNLADSSGQGEFNSNGRNSNFNATANFSNGTNEAIHTNGSLELEPTTCDPNYERNNLKVLQGPGNCMVKSPQNVSTSGGQLTEEERGSNSKLTVGLRSNRNRRSSYNICETSPVNKRKSLQSATRGSWLLLSTHEEGCRYIPQQGDEVAYLRQGHQEYIDYCRKRESGPWVSLKGHIRAVEYCRVQSLEYSHLPGSGDSCCKMNLQFVDPNSSVVGKSFKLTLPEVTSFPDFLVERTRFDAAMQRNWTRRDKCRVWWKNEDSSSGNWWDGRILCMKAKSSEFPDSPWESYTVRYKSDLTETHLHSPWELFDADTEWEQPHIDDDMRNKLQSTLTKLQQSGNPVQDRYGVHELKKISNKSKFINRFPVPISIELIQSRLENNYYRSLEALKHDVSILLSNATTFLEKDAALSAKIKRLSEWFTRALSSL 1747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1016 1051 - -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 836 879 - -
Gma15g01331 1747 SUPERFAMILY WD40 repeat-like 244 668 IPR036322 GO:0005515
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 294 IPR001680 GO:0005515
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 328 - -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1380 1416 - -
Gma15g01331 1747 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 26 1747 - -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 886 901 - -
Gma15g01331 1747 Gene3D - 396 480 IPR015943 GO:0005515
Gma15g01331 1747 ProSitePatterns Trp-Asp (WD) repeats signature. 612 626 IPR019775 -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1319 1344 - -
Gma15g01331 1747 Pfam WD domain, G-beta repeat 586 625 IPR001680 GO:0005515
Gma15g01331 1747 Pfam WD domain, G-beta repeat 333 372 IPR001680 GO:0005515
Gma15g01331 1747 Pfam WD domain, G-beta repeat 248 285 IPR001680 GO:0005515
Gma15g01331 1747 Pfam WD domain, G-beta repeat 291 326 IPR001680 GO:0005515
Gma15g01331 1747 Pfam WD domain, G-beta repeat 405 434 IPR001680 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 796 961 - -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1385 1416 - -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1237 1254 - -
Gma15g01331 1747 Pfam Bromodomain 1683 1730 IPR001487 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1269 1296 - -
Gma15g01331 1747 ProSiteProfiles Bromodomain profile. 1687 1730 IPR001487 GO:0005515
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats profile. 592 634 IPR001680 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1317 1344 - -
Gma15g01331 1747 Gene3D - 1641 1747 IPR036427 GO:0005515
Gma15g01331 1747 SMART WD40_4 585 625 IPR001680 GO:0005515
Gma15g01331 1747 SMART WD40_4 544 582 IPR001680 GO:0005515
Gma15g01331 1747 SMART WD40_4 330 372 IPR001680 GO:0005515
Gma15g01331 1747 SMART WD40_4 443 511 IPR001680 GO:0005515
Gma15g01331 1747 SMART WD40_4 288 327 IPR001680 GO:0005515
Gma15g01331 1747 SMART WD40_4 396 434 IPR001680 GO:0005515
Gma15g01331 1747 SMART WD40_4 246 285 IPR001680 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1221 1254 - -
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 337 372 - -
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 381 IPR001680 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 810 835 - -
Gma15g01331 1747 PANTHER WD REPEAT DOMAIN 9 26 1747 - -
Gma15g01331 1747 CDD Bromo_WDR9_I_like 1619 1747 - -
Gma15g01331 1747 SUPERFAMILY Bromodomain 1684 1745 IPR036427 GO:0005515
Gma15g01331 1747 CDD WD40 249 625 - -
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 336 IPR001680 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1269 1303 - -
Gma15g01331 1747 Gene3D - 242 395 IPR015943 GO:0005515
Gma15g01331 1747 Gene3D - 481 683 IPR015943 GO:0005515
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats profile. 402 434 IPR001680 GO:0005515
Gma15g01331 1747 MobiDBLite consensus disorder prediction 934 961 - -
Gma15g01331 1747 MobiDBLite consensus disorder prediction 1221 1236 - -
Gma15g01331 1747 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01331 Gma-Chr15 11803772 11828778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01331 556 670 Miscellaneous Gene Families AT5G08390 26.496 3.52e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01331 K11797 - gmx:100818665 3455.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01331 15 11803772 11828778 Gma15g01331 15 11803772 11828778 ECH
Gma15g01331 15 11803772 11828778 Gma09g00336 09 3141991 3159906 GST