Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00336 ATGAGAGTTTTGGAGAGTGCTTCTCCGGTTGAATCTCTCACTCATCTGAGTATGGCTTTGCAGAAGTATGCTCCTTCTGGCAATGCACCTTCTGTTAATATAAAACATTTGAGCTTTTCCAGTAAGGTGCCCAAGAAAGCTGAGCTCGATGAGGCAAATCCGAATCATAACATGGATGTGGATATTGACCTTAGGGAAATTTATTTTCTTATTATGCACTTTCTTTCTGCTGGGCCATGTCATAAAACTTATATACAGTTTTGGAATGAGCTTCTTGAGCATCAACTTTTGCCTAGAAGGTATCATGCTTGGTATTCAAGGACCGGAGCATGTAGTGGAGACAAAGATGATGATGGTCTATCATTCCCTTTAAATTACAATATGTTAGTAGAGAGGTATTCCCATATTGAAAAGGATCACTTGGTAAAGCTTTTGAAGCAATTGTTATTAAATACAGCCTCCCCATCACTGGGTATGAATCTTGGAAATGCTCCAAATGCAGCTGATGTACCTACTCTTCTAGGAAGTGGTTCATTTTCACTTCTGAGCTATGATAGGGACAAAATGAAAGAAGTCAAACGGCCACCTCCTCATATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCATGGGCTTAGTTTGAGGGAAATTGGGGGTGGTTTCCCAAGACACCATCGTGCACCATCTATACGTGCTGCATGCTATGCCCTTGCAAAACCTTCTACCATGGTGCAAAAGATGCAAAACATCAAGAGGTTAAGAGGACACCGCAATGCTGTCTATTGTGCTATATTTGATCGGTCAGGAAGATATGTGGTTACCGGTTCAGATGACCGACTTGTAAAAATTTGGTCAATGGAAACTGCATATTGTTTGGCCAGTTGCCGTGGACATGATGGTGACATCACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGACTGTGTCATTCGAGTTTGGCGCTTGCCAGATGGCTTGCCAATATCAGTTTTGCGGGGCCATACTGGAGCTGTTACAGCCATAGCATTTAGTCCCAGACTGAATGCTTTATACCAGCTTTTATCTTCCTCTGATGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCAGTCAAGTCCAAGATTATATGTTCCAAGGCCTTCTGATTCTGTAATTGGGAAGAGCAGTGGCCCATCTTCAAGTACTGTACCACAGAGCCGTCAGATTTTTTGCTGTGCGTTTAATGCTAATGGAACTGTCTTTGTAACTGGTAGCTCTGACAATCTTGCTAGGGTGTGGAATGCTTGTAAGCTTAGTATGGATGACACTGACCAACCAATTCATGAGATAGATGTGCTATCTGGGCATGAAAATGATGTGAATTATGTGCAATTCAGTGGATGCGCAGTAGCATCCCGGTTTTCCACAGCAGAAACTCTGAAGGAGGAAAATATTCCCAAATTTAAAAATTCCTGGTTGAATCATGACAACATAGTTACTTGCTCTCGTGATGGGAGTGCTATTATATGGATTCCTAAATCACGCAGGTCACATGGAAAAAGTGGTCGCTGGACACGAGCGTATCATCTGAGAGTTCCACCTCCACCTATGCCACCTCAACCTCAAAGAGGTGGTCCTCGTCAGAGAATTCTACCAACTCCACGCGGTGTAAATATGATTGTTTGGAGCCTTGACAACCGCTTTGTCCTTGCAGCTATTATGGACTGCAGAATTTGTGTGTGGAATGCATCTGATGGAAGCTTAGTACACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTCAATCCCCGGATAGCTATGAGTGCTGGATATGATGGAAGAACTATCGTGTGGGATATATGGGAAGGCATGCCTATCCGGACATATGAGATATCACGTTTCAAGTTGGTGGATGGAAAGTTTTCTTCGGATGGGACATCAATTATACTTTCGGATGATGTTGGTCAACTATATATATTAAGCACAGGCCAAGGCGAGTCCCAGAAAGATGCCAAATATGATCAGTTTTTTCTTGGTGATTATCGACCTCTGATTCAAGACACTCATGGTAACGTACTAGACCAGGAAACTCAAATTGTTCCATATAGACGGAATCTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATTTCAGCAAAGACGATTAGGAGCATTAGGCCTTGAGTGGCGCCCATCATCACTAAGGCTTGCTGTTGGTCCTGATTTCAGTCTGGACCCTGATTATCATATGCTTCCATTGGCAGACTTGGATTTGCTTACAGAACCACTGCCTGAGTTTATAGATGCTATGGAATGGGAACCTGAAGTTGAAGTGTTTAGTGATGATACAGATTCAGAATATAATGTCACAGAGGGTTTCTTTTCTAAGGGTGAGAAAGGAGGTTCAAGCTCCAATGCTTCTGGTGATTCAGGGTGCAGCACAGATAACAGTGAAGGGGAGGACACTTGCATGGATAGCATTCGTAGATCAAAGAGGAAAAAACAGAAGGCTGAGACTGAGGTTATGACTTCTTCTGGGAGACGTGTGAAACGGAGGAATTTGGATGAGCGTGATGGCAATACTTTCGGCAGTAGCCGAAGTAGGAAGGGAAAAAGTGTCCAAAAAACATCAAGAAGGAAATCTTCTAAATCAAAATCTTCCCGACCTCAAAGGGCTGCTGCACGCAATGCTCTGCATCTATTTTCCAAAATTACTGGTACACCAACAGATGGAGAAGAAGATAGTTTGGTTGGTGATTTTTCAGGTAGTGAATCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCCGGTGGAACTTTACAGAATGAACAACTGAATTATTCTAAGGGAAAAGAAGTATCATATTATGAATCGGAGGACACCAAATCTCACGAGTTAACTGAAACTCATGTGAATTCGATGAACAAGAGGTTGGTTCTCAAGTTGCCAAATCGTGATATATCCAAGTCCACAAATGAGTTTGGCTACCAGGCTGAGTTGGTTGGCTCATCATCAAAAACTGCACAAGAAGCTACCGATTTTAATGGGAACAGACCAAGTTCTAAGGATTCAGGGTATTGTTCTGGAAGTACAAGTTACCCTGCAGTTGAAAAAACAGATCAAGCAAAACTAGGCCAGGTGACAGACCATGTAGACTTGCTGGGGAAAATTAGATGGGGAATGGTTAGGGCTCGTTCATCTAAACCTTTGAGAGTGGGAGAAGCTATGCCATCAGACACAGATCCCTACTCTGGAAAATGTCCTAATCATCTCGATGaaaaagaaaatgttagcagtgggcatgagaaagaggacaagaactttagtgcactaacccccgaggtaacccctgagttagaaatccataaggatgactatagggtagatagtttgacagagattaatggtaaaaaagaaaatgctatcagtgggcacgagaaagaggacaagaactttagtgcactaacccctgagttaacccccgagttagaaatccaaaaggatgactataaggtagatagtttgacagagattaatgAAAATTGTGCTGGTACTACCTCACAGCCTTTTAATCTTACTGAAGATGGAGGAGAGATCACAGCTTCCAGCAATTGCAGGGACAAAAATGAATCACTAATTTCTGCTTATGTGATTCCTCAGGATATTGTAACTGCTTCCATCGGCTATAGTGAGGTTGACCAACTACCTGAACCAAATATTGGTTTTGCTTGTGTTTCAACAAAATTAAGGTCTAAAAGGGGTTCAAGGGATCCTGAAAGTCCATCCAAGCTTGAAACAAAATCTTCAGTGCTAAAGAATAGTGC 3872 0.3946 MRVLESASPVESLTHLSMALQKYAPSGNAPSVNIKHLSFSSKVPKKAELDEANPNHNMDVDIDLREIYFLIMHFLSAGPCHKTYIQFWNELLEHQLLPRRYHAWYSRTGACSGDKDDDGLSFPLNYNMLVERYSHIEKDHLVKLLKQLLLNTASPSLGMNLGNAPNAADVPTLLGSGSFSLLSYDRDKMKEVKRPPPHMRWPHMKANQVHGLSLREIGGGFPRHHRAPSIRAACYALAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRSGRYVVTGSDDRLVKIWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRLNALYQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSSGPSSSTVPQSRQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMDDTDQPIHEIDVLSGHENDVNYVQFSGCAVASRFSTAETLKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGMPIRTYEISRFKLVDGKFSSDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRNLQDLLCDSAMIPYPEPYQSEFQQRRLGALGLEWRPSSLRLAVGPDFSLDPDYHMLPLADLDLLTEPLPEFIDAMEWEPEVEVFSDDTDSEYNVTEGFFSKGEKGGSSSNASGDSGCSTDNSEGEDTCMDSIRRSKRKKQKAETEVMTSSGRRVKRRNLDERDGNTFGSSRSRKGKSVQKTSRRKSSKSKSSRPQRAAARNALHLFSKITGTPTDGEEDSLVGDFSGSESTLQESNIDSDESGGTLQNEQLNYSKGKEVSYYESEDTKSHELTETHVNSMNKRLVLKLPNRDISKSTNEFGYQAELVGSSSKTAQEATDFNGNRPSSKDSGYCSGSTSYPAVEKTDQAKLGQVTDHVDLLGKIRWGMVRARSSKPLRVGEAMPSDTDPYSGKCPNHLDEKENVSSGHEKEDKNFSALTPEVTPELEIHKDDYRVDSLTEINGKKENAISGHEKEDKNFSALTPELTPELEIQKDDYKVDSLTEINENCAGTTSQPFNLTEDGGEITASSNCRDKNESLISAYVIPQDIVTASIGYSEVDQLPEPNIGFACVSTKLRSKRGSRDPESPSKLETKSSVLKNS 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00336 1290 MobiDBLite consensus disorder prediction 836 879 - -
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 328 - -
Gma09g00336 1290 MobiDBLite consensus disorder prediction 934 958 - -
Gma09g00336 1290 MobiDBLite consensus disorder prediction 807 958 - -
Gma09g00336 1290 MobiDBLite consensus disorder prediction 886 901 - -
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats profile. 592 634 IPR001680 GO:0005515
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 288 - -
Gma09g00336 1290 ProSitePatterns Trp-Asp (WD) repeats signature. 612 626 IPR019775 -
Gma09g00336 1290 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 26 1007 - -
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 381 IPR001680 GO:0005515
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 294 IPR001680 GO:0005515
Gma09g00336 1290 Pfam WD domain, G-beta repeat 409 434 IPR001680 GO:0005515
Gma09g00336 1290 Pfam WD domain, G-beta repeat 586 625 IPR001680 GO:0005515
Gma09g00336 1290 Pfam WD domain, G-beta repeat 333 372 IPR001680 GO:0005515
Gma09g00336 1290 Pfam WD domain, G-beta repeat 291 326 IPR001680 GO:0005515
Gma09g00336 1290 Pfam WD domain, G-beta repeat 248 285 IPR001680 GO:0005515
Gma09g00336 1290 MobiDBLite consensus disorder prediction 1019 1045 - -
Gma09g00336 1290 MobiDBLite consensus disorder prediction 812 835 - -
Gma09g00336 1290 Gene3D - 547 681 IPR015943 GO:0005515
Gma09g00336 1290 PRINTS G protein beta WD-40 repeat signature 359 373 IPR020472 -
Gma09g00336 1290 PRINTS G protein beta WD-40 repeat signature 421 435 IPR020472 -
Gma09g00336 1290 PRINTS G protein beta WD-40 repeat signature 272 286 IPR020472 -
Gma09g00336 1290 Gene3D - 234 403 IPR015943 GO:0005515
Gma09g00336 1290 SUPERFAMILY WD40 repeat-like 244 668 IPR036322 GO:0005515
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 337 372 - -
Gma09g00336 1290 CDD WD40 249 625 - -
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 336 IPR001680 GO:0005515
Gma09g00336 1290 Gene3D - 404 537 IPR015943 GO:0005515
Gma09g00336 1290 MobiDBLite consensus disorder prediction 1267 1290 - -
Gma09g00336 1290 PANTHER WD REPEAT DOMAIN 9 26 1007 - -
Gma09g00336 1290 ProSiteProfiles Trp-Asp (WD) repeats profile. 402 434 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 585 625 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 246 285 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 544 582 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 446 511 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 330 372 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 288 327 IPR001680 GO:0005515
Gma09g00336 1290 SMART WD40_4 396 434 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00336 Gma-Chr9 3141991 3159906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00336 245 465 Miscellaneous Gene Families AT5G08390 23.661 2.38e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00336 K11797 - gmx:100819598 2510.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00336 09 3141991 3159906 Gma09g00336 09 3141991 3159906 ECH
Gma15g01331 15 11803772 11828778 Gma09g00336 09 3141991 3159906 GST