Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01330 ATGGCTTCTCTCTTCGCCAGAACCAAGTGGTTCTCGTTGCCTACTCTCCTGCTTCTTCTGGAGCTATTCACAATAAACCTTAGCACTGCAGATGCTCAAATTGGGGTGTGTTATGGCATGATTGGCGACAATCTACCACCGGCAAACGAAGTTGTACCTGCTTTACAAGCACTTAGAAATTCGGGCATTGAGCTTACTCTTGGGGTGCTCCAGCAAGACCTTCAAGGCCTTGCCACCAATGCCTCCATTGCTCAACAATGGGTGCAAAGTAACGTGTTGAACTTTTGGCCTAGTGTCAAAATCAAGTACGTGGTAGTTGGCAATGAAATTGATCCTGTTGGAAGTTCTTCTCAGTTTGCCCAATATGTTCTACCTGCAATCCAAAACACATACCAAGCTATAAGGGCTCAAGGCCTTCATGATCTAATCAAGGTTACAACAGCTATTAGCATGGACCTATTAGGAAACTCCTATACCCCATCACAAAACTACTTCAAGCCTGATGTGAGGTCATACATAGACCCCATAATTGGGTACTTGTTTCCTATGCTCTTTTCAACAAATGTTGTGGTTTGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTACGTTGGATGCAGTGCTTGTTGCAATTGATAACACAGGGATTGGTTATGTGGAGGTAGTTGTATCCGAGAGTGGATGA 690 0.4391 MASLFARTKWFSLPTLLLLLELFTINLSTADAQIGVCYGMIGDNLPPANEVVPALQALRNSGIELTLGVLQQDLQGLATNASIAQQWVQSNVLNFWPSVKIKYVVVGNEIDPVGSSSQFAQYVLPAIQNTYQAIRAQGLHDLIKVTTAISMDLLGNSYTPSQNYFKPDVRSYIDPIIGYLFPMLFSTNVVVWDGQYGYQNLFDATLDAVLVAIDNTGIGYVEVVVSESG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01330 229 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 184 229 IPR044965 GO:0004553|GO:0005975
Gma15g01330 229 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 54 180 IPR044965 GO:0004553|GO:0005975
Gma15g01330 229 Gene3D Glycosidases 182 229 - -
Gma15g01330 229 PANTHER OS01G0941500 PROTEIN 54 180 - -
Gma15g01330 229 PANTHER OS01G0941500 PROTEIN 184 229 - -
Gma15g01330 229 SUPERFAMILY (Trans)glycosidases 34 229 IPR017853 -
Gma15g01330 229 Pfam Glycosyl hydrolases family 17 34 180 IPR000490 GO:0004553|GO:0005975
Gma15g01330 229 Pfam Glycosyl hydrolases family 17 184 229 IPR000490 GO:0004553|GO:0005975
Gma15g01330 229 Gene3D Glycosidases 32 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01330 Gma-Chr15 11791078 11792416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01330 40 229 Glycoside Hydrolase AT4G16260 42.979 1.81e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01330 - - gmx:100783593 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01330 15 11791078 11792416 Gma09g00335 09 3132518 3134407 GST