Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00335 ATGGTTTCTCTCTTTGCCAGAACCAAGAGGTTCTCATTGCCTACACTCTTGCTTCTTCTGGAGCTATTCACGATATACCTTCGCACTGCAGATGCTCAAATTGGGGTGTGTTATGGCATGATGGGCGACAATCTACCACTGGCAAATGAAGTTACCTTCAAGGCCTTGCCACCTAGCACTGCTCAACAATGGGTGCAAAGTAACGTGTTGAACTTTTGGCCTAGTGTCAAAATCAAGCACGTGGTAGTTGGCAACGAAATTAATCCTGTTGGAAGCTCTTCTGAGTTTGCCCAATATGTTCTACCTGCAATCCAAAACATATACCAAGCTATAAGAGCTCAAGGCCTTCAAGATCTAATCAAGGTTACAACAGCTATTGACATGACCCTGTTAGGAAACTCCTACCCCCCATCACAAAGCTACTTCAGGACTGATGTGAGATCATACTTAGACCCCATAATTGGGTACTTGGTATATGCAAATGCACCTTTACTAGCCAATGTGTTGCCTTATTTTAGTTACTCCAATAACCCGATTGACATATCACTTTCCTATGCTCTTTTTAACTCAACAAATGTTGTGGTTTGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATGTTGGATGCGGTGCATGTTGCAATTGATAACACAGGGATTGGTTATGTGGAGGTTGTTGTATCCGAGAGTGGATGGCCCTCAGATGGAGGGTTTGCTGCCACTTATGACAACGCACATGTCTACCTGGAAAATTTGATTCTTCGTGCTAAAAGAGGTAGCCCAAGAAGACCTTCAAAGCCCACAGAAACTTATATATTCGACATGCTTGATGAGAATCTTAAGAGTCCTGAGATAGAGAAACATTTTGGACTCTTCTTTCCCAACAAAACAAAGAAGTATCCATTTGGATTTGTTTAG 924 0.421 MVSLFARTKRFSLPTLLLLLELFTIYLRTADAQIGVCYGMMGDNLPLANEVTFKALPPSTAQQWVQSNVLNFWPSVKIKHVVVGNEINPVGSSSEFAQYVLPAIQNIYQAIRAQGLQDLIKVTTAIDMTLLGNSYPPSQSYFRTDVRSYLDPIIGYLVYANAPLLANVLPYFSYSNNPIDISLSYALFNSTNVVVWDGQYGYQNLFDAMLDAVHVAIDNTGIGYVEVVVSESGWPSDGGFAATYDNAHVYLENLILRAKRGSPRRPSKPTETYIFDMLDENLKSPEIEKHFGLFFPNKTKKYPFGFV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00335 307 Pfam Glycosyl hydrolases family 17 59 304 IPR000490 GO:0004553|GO:0005975
Gma09g00335 307 Gene3D Glycosidases 50 307 - -
Gma09g00335 307 SUPERFAMILY (Trans)glycosidases 34 304 IPR017853 -
Gma09g00335 307 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 61 304 - -
Gma09g00335 307 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 61 304 IPR044965 GO:0004553|GO:0005975
Gma09g00335 307 ProSitePatterns Glycosyl hydrolases family 17 signature. 225 238 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00335 Gma-Chr9 3132518 3134407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00335 58 306 Glycoside Hydrolase AT4G16260 59.363 1.80e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00335 - - gmx:100783593 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00335 09 3132518 3134407 Gma09g00335 09 3132518 3134407 ECH
Gma15g01330 15 11791078 11792416 Gma09g00335 09 3132518 3134407 GST