Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01271 ATGGTGAAGGTGCGCATGAACACAGCCGATGTCGCCGCCGAGGTCAAATGCCTCCGCCGCCTCATCGGAATGCGATGCTCCAACGTCTACGATCTCTCTCCCAAGACCTACGTGTTCAAGCTGATGAACAGCAGTGGAGTATCGGAATCGGGCGAGAGCGAGAAGGTTCTTCTGCTGATGGAAAGTGGCGTGAGATTGCACACTACTCTCTACATGCGTGACAAGAGCAACACTCCTTCTGGTTTCACTCTCAAATTGAGGAAGCACATTCGGACTCGAAGGCTCGAGGATGTGCGTCAACTTGGGTACGATCGGATTATTCTCTTTCAATTTGGACTTGGAGAGAATGCAAACTATGTCATATTGGAGCTGTATGCTCAGGGGAACATCCTCCTCACAGATTCTACTTTTACTGTCATGACTCTGCTACGGTCTCACAGGGATGATGATAAAGGGCTTGCAATTATGTCACGCCATCGTTATCCTGTGGAAAGTTGCAGAGTTTTTGAACGAACTACTATTGAAAAGTTGCGTACATCCCTAGTGTCTTCCAAGGAAGATGATGCTGATGAGGCTGTTAAGGCCAATGGAAATGGAAGTAATGCTTCCAACGTAGCAAAAGAGAAGCAGGAAACCCGCAAAGGTGGGAAGTCGTCTGCCACATTGAAAATTGTCCTTGGGGAGGCCCTTGGTTATGGACCTGCACTTTCTGAACATATAATATTAGATGCTGGCCTAATCCCTAGTACAAAAGTTCCCAAAGATAGAACGTGGGATGATGCTACTGTTCAAGCGCTGGTCCAAGCTGTTGTGAAGTTTGAGGATTGGATGCAGGATGTTATTTCAGGTGAAATAGTCCCTGAAGGATACATTTTGATGCAGAACAAAAATCTGGGGAAGGATTCATCCATATCTCAACCAGGAAGTGTTAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAGTTTAAGTCAAGGGATTATACAAAGTTTGAGACATTTGATGCAGCCTTGGATGAGTTCTATAGCAAAATTGAGTCTCAAAGGGCTGAACAACAGCAGAAATCCAAAGAAAACTCAGCTGCTCAGAAACTTAATAAGATTCGTCAAGATCAGGAAAATCGAGTACATGTTTTGAGGAAAGAGGCTGATCACTGTGTTAAGATGGCAGAATTGATAGAATACAACTTGGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAGGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGTCTCATTGACAAGCTCCATCTTGAGAGGAACTGCATGAATTTACTGTTAAGCAACAATCTTGATGAAATGGATGATGATGAGAAGACACTCCCTGTGGATAAGGTTGAAGTTGATTTAGCTCTCTCAGCACATGCCAATGCTCGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGAAAAAACTGTAACTGCCCATGAAAAGGCTTTTAAAGCTGCAGAGAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGCAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAACTATTTGGTTATCAGTGGACGTGATGCACAGCAAAATGAGCTGATAGTGAAGCGATATATGTCAAAAGGAGATCTATATGTACATGCTGATCTGCACGGAGCTTCTAGTACAGTTATTAAGAATCACAAGCCTGCACAACCAGTTCCACCTCTGACCCTAAACCAAGCAGGATGCTTCACAGTCTGCCATAGCCAGGCATGGGATTCGAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAAGTTAGTAAAACTGCTCCTACAGGCGAATATTTGACAGTAGGGAGTTTCATGATCCGTGGAAAGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGCCTACTATTTCGCTTGGATGAGAGTTCCTTGGGATCTCATTTAAATGAAAGAAGAGTAAGAGGAGAGGAGGAAGCAGCAGATGATTATGAAGAAACTGGTCCTCTTGAAGGCAAATCTGATTCAGAGTTTGAGAAGGATGTCACTGATATAAAATCTGCCACTGACTCAGAAAGGAATGATAATTTGTCGGCAGATTCACACAAACCCCTACCAGAAGACTTCCCTGCAGATGCATCTCAAACTAGTTTGGCCACTATCAATGCTGAAACTGCAATTTCACAAGATTTTCCTGCGAAAGAGACAAGTACGTTGAATGTGGTTGATAGGGAGATATTATCAGATGTTAGTGGAAATGGCTTAGCATCTGTGACCCCTCAACTTGAGGAACTTCTTGATCAAGTTCTGGAACTTGGACCCATTGCTAAATCAAATAAAAAATATGGAATTGAGAAGTCTCAAATTGATTTAGACACTGAACAATATCTTGAACAAAGCAAAACTGCAGTAAGGGATAAACCTTATATATCAAAAGCTGAGAGACGAAAGCTTAAAAAAGAACAGAAACATGGAGAAGAAGATTTGAATGTTGAACATGGAAAGTATGAATCAAAGCTAAAAGATATTTCTGCTAATCTACAAGCGAAAGAAGATCAAAATTTGAAAAAAGGTGGTGGTCAAAAAATCAGCCGTGGACAGAAGGGAAAGCTTAAGAAGATAAAGGAGAAGTATGCTGACCAGGACGAGGAAGAAAGGAGCATCCGAATGGCATTGTTAGCTTCTTCTGGAAAATCAATCAAGAAGGAAGAGACATCATCTGAAAATGATACATTGGACCAAGGGAAAAAACCTGGCAGTGGTCCTTCTGACGCTCCAAAAGTACCTTCTGATGCTCCAAAAATATGTTACAAGTGTAAGAAGGCAGGTCACTTATCTCGGGATTGTAAGGAGCAACCAGATGGTCTTTTGCATAGGAATGCAATTGGTGAAGCTGAAGAAAATCCCAAATCGACTGCTATTGACACTTCCCAAGCAGATAGGGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAATTAAATGACGTAGATTACTTGACAGGGAATCCACTTCCTAATGACATTCTCTTATATGCTGTTCCTGTTTGTGGTCCTTATAGTGCAGTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCGGCGAAGAAAGGGAAAGCTGCAAAAACTGCTATGAACCTATTCAGCCACATGTCAGAAGCAACAACCCGGGAGAAGGAGTTGATGAAAGCCTGTACAGATCCAGAGCTAGTTGCTGCAATTGTTGGTAATGTGAAAATATCAGCAGCTGGCCTTACTCAATTGAAGCAAAAACAAAAGAAAGGCAAGAAGAGCAGCAAACAAGAGAGTTAG 3432 0.4228 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHTTLYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDSTFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLRTSLVSSKEDDADEAVKANGNGSNASNVAKEKQETRKGGKSSATLKIVLGEALGYGPALSEHIILDAGLIPSTKVPKDRTWDDATVQALVQAVVKFEDWMQDVISGEIVPEGYILMQNKNLGKDSSISQPGSVSQMYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRAEQQQKSKENSAAQKLNKIRQDQENRVHVLRKEADHCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMNLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPAQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEAADDYEETGPLEGKSDSEFEKDVTDIKSATDSERNDNLSADSHKPLPEDFPADASQTSLATINAETAISQDFPAKETSTLNVVDREILSDVSGNGLASVTPQLEELLDQVLELGPIAKSNKKYGIEKSQIDLDTEQYLEQSKTAVRDKPYISKAERRKLKKEQKHGEEDLNVEHGKYESKLKDISANLQAKEDQNLKKGGGQKISRGQKGKLKKIKEKYADQDEEERSIRMALLASSGKSIKKEETSSENDTLDQGKKPGSGPSDAPKVPSDAPKICYKCKKAGHLSRDCKEQPDGLLHRNAIGEAEENPKSTAIDTSQADRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYSAVQSYKYRVKIIPGPAKKGKAAKTAMNLFSHMSEATTREKELMKACTDPELVAAIVGNVKISAAGLTQLKQKQKKGKKSSKQES 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01271 1143 MobiDBLite consensus disorder prediction 682 739 - -
Gma15g01271 1143 Pfam NFACT protein C-terminal domain 1028 1121 IPR021846 -
Gma15g01271 1143 PANTHER - 3 1131 - -
Gma15g01271 1143 Pfam Zinc knuckle 967 983 IPR001878 GO:0003676|GO:0008270
Gma15g01271 1143 MobiDBLite consensus disorder prediction 839 870 - -
Gma15g01271 1143 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1131 - -
Gma15g01271 1143 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Gma15g01271 1143 SMART c2hcfinal6 967 983 IPR001878 GO:0003676|GO:0008270
Gma15g01271 1143 MobiDBLite consensus disorder prediction 682 743 - -
Gma15g01271 1143 Gene3D - 962 1017 - -
Gma15g01271 1143 SUPERFAMILY Retrovirus zinc finger-like domains 957 987 IPR036875 GO:0003676|GO:0008270
Gma15g01271 1143 MobiDBLite consensus disorder prediction 883 964 - -
Gma15g01271 1143 MobiDBLite consensus disorder prediction 188 214 - -
Gma15g01271 1143 Pfam NFACT protein RNA binding domain 541 652 IPR008532 -
Gma15g01271 1143 MobiDBLite consensus disorder prediction 905 921 - -
Gma15g01271 1143 Pfam NFACT N-terminal and middle domains 10 161 - -
Gma15g01271 1143 Pfam NFACT N-terminal and middle domains 218 524 - -
Gma15g01271 1143 Coils Coil 364 384 - -
Gma15g01271 1143 ProSiteProfiles Zinc finger CCHC-type profile. 968 983 IPR001878 GO:0003676|GO:0008270
Gma15g01271 1143 Coils Coil 865 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01271 Gma-Chr15 11168824 11178251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01271 K24971 - gmx:100807437 2166.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01271 15 11168824 11178251 Gma15g01271 15 11168824 11178251 ECH
Gma15g01271 15 11168824 11178251 Gma09g00290 09 2673136 2682853 GST