Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00290 ATGGTGAAGGTTCGCATGAACACCGCCGATGTCGCCGCCGAGGTCAAATGCCTCCGCCGCCTCATCGGAATGCGATGCTCCAACGTCTACGATCTTTCTCCCAAGACCTACGTGTTCAAGCTTATGAACAGCAGTGGAGTTTCCGAATCTGGGGAGAGCGAGAAGGTTCTGCTGCTGATGGAAAGTGGCGTGAGATTGCACACTACTCTCTACTTGCGTGACAAGAGCAACACTCCCTCTGGTTTCACTCTCAAATTGAGGAAGCACATTCGAACCAGAAGGCTCGAGGATGTGCGCCAACTTGGGTACGATCGGATTATTCTCTTTCAATTTGGACTTGGGGAGAATGCAAACTATGTCATATTGGAGCTGTATGCTCAGGGGAACATCCTCCTCACAGATTCTACTTTTACTGTCATGACTCTGCTACGGTCTCACAGGGATGATGATAAAGGGCTTGCAATTATGTCACGCCATCGTTATCCTGTGGAAAGCTGTAGAGTTTTTGAGCGAACTACTATTGAAAAGTTGCGGACATCCCTAGTGTCTTCCAAGGAAGATGATAACGATGATGCTGTTAAGGCCGATGGAAATGGAAGTAATGCATCTAATGTAGCAAAAGAGAAGCAGGGAACCCACAAAGGTGGGAAGTCATCTGCCACATTGAAAATTGTCCTTGGGGAGGCCCTTGGTTATGGACCTGCACTTTCTGAACATATACTATTAGATGCTGGCCTAATCCCCAGTACAAAAGTTCCCAAAGATAGAACGTGGGATGATGCTACTGTTCAGGCGCTGGTCCAAGCTGTTGTGAGGTTTGAAGATTGGATGCAGGATGTTATTTCAGGTGAATTAGTCCCTGAAGGATACATTTTGATGCAGAACAAAAATATGGGGAAGGATTCTTCCATATCTCAACCAGGAAGTGTTAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAGTTTAAGTCAAGGGATTATACAAAGTTTGAGACATTCGATGCAGCCTTGGATGAGTTCTATAGCAAAATTGAGAGCCAAAGATCTGAACAACAGCAGAAAGCCAAAGAAAACTCAGCTTCTCAGAAACTTAATAGGATTCGCCAGGATCAGGAAAATCGAGTACATGCTTTGAGGAAAGAAGCTGATCACTGTGTTAAGATGGCAGAATTGATAGAATATAACTTGGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAGGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGTCTCATTGACAAGCTTCATCTCGACAGGAACTGCATGACTTTACTGTTAAGCAACAATCTTGATGAAATGGATGATGATGAGAAGACACTCCCTGTGGATAAGGTTGAAGTTGATTTAGCTCTCTCAGCACATGCCAATGCTCGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGGAAAAACTGTAACTGCCCATGAAAAGGCTTTTAAAGCTGCAGAGAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGTAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAACTATTTGGTTATCAGTGGACGTGATGCACAGCAAAATGAGATGATAGTGAAGCGTTATATGTCAAAAGGAGATCTATATATACATGCTGATCTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAGCCTGCACAACCAGTTCCACCTCTGACCCTAAACCAAGCTGGATGTTTCACCGTCTGCCATAGCCAGGCCTGGGATTCGAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACTGCTCCTACAGGCGAATATCTGACAGTAGGGAGTTTCATGATCCGTGGAAAGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGCCTACTATTTCGCTTGGATGAGAGTTCCTTGGGATCTCATTTAAATGAAAGAAGAGTAAGAGGAGAGGAGGAAGCAGCAGATGATTATGAAGAAACTGGCCCTCTTGAAGATAAATCTGATTCAGAGTCTGAGAAGGATGTCACTGATATAGAACCTGCCACTGACTTGGAAAGGAATGGTAATTTGTCAGCAGATTCACACAAACCCCTACCAGAAGACTTCCCTGCAGATCCATCCCAAACTAGTTTGGCTACTACCGATGCCGAAACTGCAATTTCACAGGATTTTCCTGCGAAAGAGACAAGTACATTGAATATGGTTGATAGGGAGATATTATCAGATGTTGGTGGAAATGGCTTAGCATCTGTCACCCCTCAGCTTGAGGAACTTCTTGATCAAGCTCTGGAACTTGGACCTGTTGCTAAATCAAGTAAAAAATATGGAATTGAGAAGTCTCAAATTGATTTAGACACTGAACAACATTTTGAACAAACCAAAACTGCAGTAAGGGAAAAACCTTATATATCAAAAGCTGAGAGACGAAAGCTTAAAAAAGAACAGAAACCTGGAGAAGAAGATTCAAATGTTGAACATGGAAAGGATGAATCAAAGCTAAAAGATATTTCTGCTAATCTACCAGTGAAAGAAGATCAAAATTTGAAAAAAGGTGGTGGTCAAAAAATCAGTCGTGGACAGAAGGGAAAACTTAAGAAGATAAAGGAGAAGTATGCTGACCAGGACGAGGAAGAAAGGAGCATCCGAATGACATTGTTGGCTTCTTCTGGAAAATCAATCACGAAGGAAGAGACATCATCTGAAAATGATGCATTGGACAAAGGGAAAAAACCTGGCAGTGGTccttcggatgctccaaaaataccttctgatgctccaaaaataTGTTACAAGTGTAAGAAGGCAGGTCACTTATCTCGGGATTGTAAGGATCAACCAGATGATCTTTTGCATAGGAATGCAGTTGGTGAAGCTGAAGAGAATCCCAAAACAACTGCTATTGATACTTCCCAAGCAGATAGGGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAGGAGAAAGAAAAATTAAATGACGTAGATTACTTAACGGGGAATCCACTTCCTAATGACATTCTCTTATATGCTGTTCCTGTCTGTGGTCCTTACAGTGCAGTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCGACCAAGAAAGGGAAAGCTGCAAAAACTGCAACGAACCTATTCAGCCACATGTCAGAAGCAACAACCCGGGAGAAGGAGTTGATGAAAGCCTGTACAGATCCAGAGCTAGTTGCTGCAATTGTTGGTAATGTGAAAATATCGGCAGCTGGCCTTACGCAATTAAAGCAAAAACAAAAGAAAGGCAAGAAGAGCAGCAAACAAGAGAGTTAA 3432 0.4216 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHTTLYLRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDSTFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLRTSLVSSKEDDNDDAVKADGNGSNASNVAKEKQGTHKGGKSSATLKIVLGEALGYGPALSEHILLDAGLIPSTKVPKDRTWDDATVQALVQAVVRFEDWMQDVISGELVPEGYILMQNKNMGKDSSISQPGSVSQMYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSASQKLNRIRQDQENRVHALRKEADHCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLDRNCMTLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQGKTVTAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYIHADLHGASSTVIKNHKPAQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEAADDYEETGPLEDKSDSESEKDVTDIEPATDLERNGNLSADSHKPLPEDFPADPSQTSLATTDAETAISQDFPAKETSTLNMVDREILSDVGGNGLASVTPQLEELLDQALELGPVAKSSKKYGIEKSQIDLDTEQHFEQTKTAVREKPYISKAERRKLKKEQKPGEEDSNVEHGKDESKLKDISANLPVKEDQNLKKGGGQKISRGQKGKLKKIKEKYADQDEEERSIRMTLLASSGKSITKEETSSENDALDKGKKPGSGPSDAPKIPSDAPKICYKCKKAGHLSRDCKDQPDDLLHRNAVGEAEENPKTTAIDTSQADRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYSAVQSYKYRVKIIPGPTKKGKAAKTATNLFSHMSEATTREKELMKACTDPELVAAIVGNVKISAAGLTQLKQKQKKGKKSSKQES 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00290 1143 Pfam NFACT protein C-terminal domain 1028 1121 IPR021846 -
Gma09g00290 1143 Gene3D - 962 1016 - -
Gma09g00290 1143 SUPERFAMILY Retrovirus zinc finger-like domains 961 986 IPR036875 GO:0003676|GO:0008270
Gma09g00290 1143 MobiDBLite consensus disorder prediction 820 878 - -
Gma09g00290 1143 Pfam Zinc knuckle 967 982 IPR001878 GO:0003676|GO:0008270
Gma09g00290 1143 ProSiteProfiles Zinc finger CCHC-type profile. 968 983 IPR001878 GO:0003676|GO:0008270
Gma09g00290 1143 Pfam NFACT protein RNA binding domain 541 652 IPR008532 -
Gma09g00290 1143 Pfam NFACT N-terminal and middle domains 220 521 - -
Gma09g00290 1143 Pfam NFACT N-terminal and middle domains 10 161 - -
Gma09g00290 1143 PANTHER - 3 1131 - -
Gma09g00290 1143 SMART c2hcfinal6 967 983 IPR001878 GO:0003676|GO:0008270
Gma09g00290 1143 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 935 949 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 682 751 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 703 720 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 185 217 - -
Gma09g00290 1143 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1131 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 351 372 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 820 965 - -
Gma09g00290 1143 MobiDBLite consensus disorder prediction 905 921 - -
Gma09g00290 1143 Coils Coil 364 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00290 Gma-Chr9 2673136 2682853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00290 K24971 - gmx:100803745 2169.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00290 09 2673136 2682853 Gma09g00290 09 2673136 2682853 ECH
Gma15g01271 15 11168824 11178251 Gma09g00290 09 2673136 2682853 GST