Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00403 ATGGACATTGATCTTTCTCCTCAGTTGCCCAAGAAAGTTTACGGTGCCAATGGTGGCTCCTACTACGCATGGTCCCCCTCCGACCTTCCCATGCTCCACCAAGGCAACATTGGTGCCGCTAAGCTTGCTCTCAACAAAAACGCCTTTGCTCTTCCTCGTTACTCTGACTCTTCCAAAGTCGCTTATGTTCTTCAAGGTAGTGGAGTGGCTGGAATAGTGTTGCCTGAATCAGAAGAGAAGGTTGTTGCAATAAAGAAGGGTGATGCCTTGGCACTCCCCTTTGGTGTTGTGACCTGGTGGTATAACAAGGAAGAAACTGAGTTGGTTGTTCTGTTCCTTGGGGACACTTCCAAGGCTCACAAGGCTGGTGAATTCACTGACTTTTTTCTGACTGGTTCCAATGGAATCTTCACTGGCTTTTCCACCGAGTTTGTGGGCAGGGCTTGGGACTTGGAAGAGAGTCATGTCAAGACCCTTGTTGGAAAACAACCAGCCAAAGGGATTGTGCAGCTGGAAGGAAACATCAGCCTTCCCGACCCTAAACCGGAGCACCGAAATGGCATGGCCTTGAACTGTGAAGAGGCTCCATTGGATGTTGACATCAAGGGTGGTGGAAGGGTTGTGGTGTTGAACACCAAGAATCTTCCCTTGGTTGGCGAGGTTGGACTAGGGGCTGATCTTGTGAGGCTGGATGGAAGAGCCATGTGTTCGCCTGGATTCTCTTGTGATTCTGCTTTGCAGGTTACTTATATTGTCAGGGGTAGTGGCCGGGTTCAGGTTGTTGGTGTTGACGGCCGTAGGGTTTTGGAGACAACCGTGAAAGCTGGTAATTTGTTCATTGTGCCAAGGTTTTTTGTGGTGTCCAAGATTGCTGATCCTGATGGACTGGAGTGGTTCTCTATCATCACTACCCCTAATCCTATATTTACCCACTTGGCAGGAAGTTCTTCCGTGTGGAAGGCTTTATCACCTTCGGTTTTGCAAGCTGCTTTCAATGTAGATCCAGAAGTTGAGCAACTGTTCCGTTCAAAGAGGACTGCCGATGCCATTTTCTTCCCTCCACCAAACTAG 1071 0.4893 MDIDLSPQLPKKVYGANGGSYYAWSPSDLPMLHQGNIGAAKLALNKNAFALPRYSDSSKVAYVLQGSGVAGIVLPESEEKVVAIKKGDALALPFGVVTWWYNKEETELVVLFLGDTSKAHKAGEFTDFFLTGSNGIFTGFSTEFVGRAWDLEESHVKTLVGKQPAKGIVQLEGNISLPDPKPEHRNGMALNCEEAPLDVDIKGGGRVVVLNTKNLPLVGEVGLGADLVRLDGRAMCSPGFSCDSALQVTYIVRGSGRVQVVGVDGRRVLETTVKAGNLFIVPRFFVVSKIADPDGLEWFSIITTPNPIFTHLAGSSSVWKALSPSVLQAAFNVDPEVEQLFRSKRTADAIFFPPPN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00403 356 CDD cupin_11S_legumin_N 4 173 - -
Gma15g00403 356 SMART Cupin_1_3 195 339 IPR006045 -
Gma15g00403 356 SMART Cupin_1_3 3 157 IPR006045 -
Gma15g00403 356 Gene3D Jelly Rolls 3 194 IPR014710 -
Gma15g00403 356 SUPERFAMILY RmlC-like cupins 9 345 IPR011051 -
Gma15g00403 356 Pfam Cupin 9 156 IPR006045 -
Gma15g00403 356 Pfam Cupin 199 338 IPR006045 -
Gma15g00403 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
Gma15g00403 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Gma15g00403 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Gma15g00403 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Gma15g00403 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Gma15g00403 356 PANTHER - 2 347 - -
Gma15g00403 356 CDD cupin_11S_legumin_C 198 353 - -
Gma15g00403 356 PANTHER OS03G0336100 PROTEIN-RELATED 2 347 - -
Gma15g00403 356 Gene3D Jelly Rolls 195 356 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00403 Gma-Chr15 3361433 3363859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00403 35 336 Miscellaneous Gene Families AT2G18540 22.727 2.10e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00403 - - gmx:100795038 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00403 15 3361433 3363859 Gma15g00403 15 3361433 3363859 ECH
Gma13g02962 13 44198188 44200900 Gma15g00403 15 3361433 3363859 GST
Gma15g00403 15 3361433 3363859 Gma12g00593 12 4970826 4973712 PCT
Gma15g00403 15 3361433 3363859 Gma11g01302 11 11121461 11123497 PCT
Gma12g00593 12 4970826 4973712 Gma15g00403 15 3361433 3363859 PCT
Gma11g01302 11 11121461 11123497 Gma15g00403 15 3361433 3363859 PCT