Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00381 ATGGGAGACATGGTGGATTATTCTGACTTGAGCAAGATCCCAAAACGAGGCAGTGTCGTGACTGAGAATAAAGCATACAAAAATCTGCTAATTGCATCTCTTCCTAAAAGTTTTGTACAGAGAAACCATGGACATCTCATTTCACTGGTCCGTGGCCGCTTTGGAATTAGAGATGTGGGTGGTATCACATTTTTTTTACTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGTTCTCCAAGAGCAGATGCCCATGTATATGGCGAGGCCTTCAGGCTCTACAAATCCTATGTTACCCACCTTTTAAATGGATTCAGAGGTGGGAACCCTTCAAGAATTTGGTTGACAGCATGCAGGTCCTATCAAGACCGTTGCTAGCCCTTTCAATTGCAACGTTGTTTTCTGATCTATCAAAATGTAGTGATGGAAAGTCAGATTGTAGTACTGATTCACAAGATGCAGTAGCATACTCAGAATTATCTCCTTTACAGGTTGATTTGAATACAGGCAAGTGTTTGACAGATCCTAAAATTTTAGAATCTGAGAAGTGGTTGACTCTACTCATTCAAGAGCTTGAAAATCAAGGGCTTAGTTTACCAGAAAGAATCAATGATGACGAGCTTAGCAGATTTTATGCCGCTTCTAATAATGATTTTTCATGCTTCCTTACCTCAATAAAGAAGACCATACGATGGCGAGAGACTTACAGAATTCTCTCAGAAGAAGAGCTGAAAATGTGGTCCAAAATGGTGTTCTGGCATGGGTCTGATGTGGGGCACAGACCTTGCCTAATCGTAAGGCTTGGGTTAGCCTGCAGTACATTGACATCTGGAGATAGACCTCGATTTGCTCAGGCAGTCATATCACAGGTAGAATATGGCGTCTTGCACTTGGTTGATGCAGGCAACCCACAAATTACAGTGTTGGTGGACTGTGAAGGGTTGCCACCAGTGAGGATTCCCATGCAAATAATCAGATCTTGTTCTTCTCTTCTGCAAGACCACTTTCCTAATTGTCTTGGTTGCATGTTTGTCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTATCAGAAAGTTCTTTCTGACTATCTGCCAAAACTGCCTTCATATCTTGGAGGCTGCTGTACTTGCATGAAATGCTCCAACATTGACCATGGGAATATGCTGCAAACTTATGCAACTGGGACCAGCAGGAGAGATGGGTTGGAGGACACCACTGACAGAGACAATGACAATGAGGATTCTCCAACATTGCATCCTTCCAATGAATTAGAAGGCAACTTATATGCTAATTATGACCAGTTGTTAAGAACTGCTATAGTAGGTATTCTTATGTTTTGGGTTTTTATAGCTCTTGGTGCTTTAGTATTTGATCCCAGCAATCTTCACTAG 1455 0.4179 MGDMVDYSDLSKIPKRGSVVTENKAYKNLLIASLPKSFVQRNHGHLISLVRGRFGIRDVGGITFFLLKVAALEIIRRFSKSRCPCIWRGLQALQILCYPPFKWIQRWEPFKNLVDSMQVLSRPLLALSIATLFSDLSKCSDGKSDCSTDSQDAVAYSELSPLQVDLNTGKCLTDPKILESEKWLTLLIQELENQGLSLPERINDDELSRFYAASNNDFSCFLTSIKKTIRWRETYRILSEEELKMWSKMVFWHGSDVGHRPCLIVRLGLACSTLTSGDRPRFAQAVISQVEYGVLHLVDAGNPQITVLVDCEGLPPVRIPMQIIRSCSSLLQDHFPNCLGCMFVIRLPANVLVISQTFIQTLEPATRNKLKIEGEMYQKVLSDYLPKLPSYLGGCCTCMKCSNIDHGNMLQTYATGTSRRDGLEDTTDRDNDNEDSPTLHPSNELEGNLYANYDQLLRTAIVGILMFWVFIALGALVFDPSNLH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00381 484 SUPERFAMILY CRAL/TRIO domain 248 399 IPR036865 -
Gma15g00381 484 MobiDBLite consensus disorder prediction 421 439 - -
Gma15g00381 484 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 15 482 - -
Gma15g00381 484 Gene3D - 178 430 IPR036865 -
Gma15g00381 484 Pfam CRAL/TRIO domain 247 394 IPR001251 -
Gma15g00381 484 MobiDBLite consensus disorder prediction 417 443 - -
Gma15g00381 484 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 240 400 IPR001251 -
Gma15g00381 484 SMART sec14_4 244 397 IPR001251 -
Gma15g00381 484 CDD SEC14 240 394 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00381 Gma-Chr15 3212747 3216557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00381 - - gmx:100786215 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00381 15 3212747 3216557 Gma15g00381 15 3212747 3216557 ECH
Gma15g00381 15 3212747 3216557 Gma11g01280 11 10921946 10927317 PCT
Gma11g01280 11 10921946 10927317 Gma15g00381 15 3212747 3216557 PCT