Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01280 ATGCCTTCAGTTTACATGGGAGATAGGATGGATAATTCTAACTCGAGCTTGAGTTCTAATTCTAAAGAAAGCAGCGTTGTTGTTAATGGGAAAGAAACGTACAAAAAACTTCTGGTTGCATCACGGCCTAAAGGCTTTGCACAGAGAAATTATGAACACCTTGTGTCATTAACCCATGGTGACTTTGGAAGCAGTGCTGTGGGACGTGTCACGTTTTTTCTACTAAAACTTGCTGCATTAGAAACCGTGAGGAGATTCTCCAGGAGTAAATGTCCGTGTGTATGGCGAGGCCTACAGGGTCTCCAAATCCTTGTCTATCCACCATTCAAATGGATTCAGAGGTGGGCACCCTTCAGGGGTTTGGTGAAAAGCATGCAGGTACTATCAAGACCTCTATTAGTCCTTTCTATTGCAACCGTCTTTACTGATCAACCACAATGTAGTGATGGAACCTCAGATTGTGTTGCTTCGCATGATTCTGAAGCATCCGCCGAACTATCTCCAGCAGAGGCTAATTTGAATACAAGTCATTGTGAGATAGATCCTGAAGTTTTAGAATATGAAAACTGGTTGACTCTACTCAATCAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACACAGCTTCTAATAATGACTCTTCATGCTTCCTTACCTCAATCAAGAAGACAATAAGTTGGCGGGACAGTTACAGATTTCTTTCAGGGGAAGAGCTGGAAACGTGGTCAAATATGGTTTTCTGGCATGGATCTGATTTTTCGCACAGACCTTGCCTCATTGTAAGGCTTGGGATAGCCTGTCGCTCTTTGGCATCTGAAGATAGACTTCAATTTGCTCAGGCAGTTATATCACAGGTAGAATACGGAGTCTTGCACTTGGTTGATGCAAGCAACCCTCAAATTACAGTATTGGTGGATTGTGAAGGGTTATCTCCATTGAGAATTCCTATGAAAATGTTGAGATCTTGTTCCTCCCTTCTGCTAGAACACTTTCCTAATCGTCTTGGTTGTTTGTTTATCATCCGACTTCCAGCAATTGTTCGTGTTATTGCCCAGACTTTTATTCAGGTTTTAAAGCCATCTACTAGGAAGAAGTTGAAGTTAGGAGGAGAGGTATATCGGAAGGTACTTTATGACAATTTTCCGACCCTACCATCATATCTTGGAGGCAGCTGCTCTTGCATGAGATGTTCTAAAATTGGCAACTGGGATATTCTGCAACCTCATGCAACTGGGACCAGCCGGATTGATAGAGAGGAGGATATCAGTGACAATAGGGGTTTGCCATCACTGCATCAATCTAATGAATTAGATGGCCACCAAACCAGCAATTCTGACCAGCTGTTGAGAAAGGCTGTCATAAGTATTCTCGTATTTTGGGTTTTCATAGCTCTTGGTGCTGGAATTTACGATCCTGGTAGTCTTCATTTACCCCCATAA 1473 0.4229 MPSVYMGDRMDNSNSSLSSNSKESSVVVNGKETYKKLLVASRPKGFAQRNYEHLVSLTHGDFGSSAVGRVTFFLLKLAALETVRRFSRSKCPCVWRGLQGLQILVYPPFKWIQRWAPFRGLVKSMQVLSRPLLVLSIATVFTDQPQCSDGTSDCVASHDSEASAELSPAEANLNTSHCEIDPEVLEYENWLTLLNQELENQGISLPERINDDELHRFYTASNNDSSCFLTSIKKTISWRDSYRFLSGEELETWSNMVFWHGSDFSHRPCLIVRLGIACRSLASEDRLQFAQAVISQVEYGVLHLVDASNPQITVLVDCEGLSPLRIPMKMLRSCSSLLLEHFPNRLGCLFIIRLPAIVRVIAQTFIQVLKPSTRKKLKLGGEVYRKVLYDNFPTLPSYLGGSCSCMRCSKIGNWDILQPHATGTSRIDREEDISDNRGLPSLHQSNELDGHQTSNSDQLLRKAVISILVFWVFIALGAGIYDPGSLHLPP 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01280 490 MobiDBLite consensus disorder prediction 1 24 - -
Gma11g01280 490 SMART sec14_4 251 404 IPR001251 -
Gma11g01280 490 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 15 485 - -
Gma11g01280 490 MobiDBLite consensus disorder prediction 8 24 - -
Gma11g01280 490 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 259 407 IPR001251 -
Gma11g01280 490 Pfam CRAL/TRIO domain 255 401 IPR001251 -
Gma11g01280 490 SUPERFAMILY CRAL/TRIO domain 254 406 IPR036865 -
Gma11g01280 490 CDD SEC14 248 401 IPR001251 -
Gma11g01280 490 Gene3D - 186 433 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01280 Gma-Chr11 10921946 10927317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01280 - - gmx:100814843 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01280 11 10921946 10927317 Gma11g01280 11 10921946 10927317 ECH
Gma15g00381 15 3212747 3216557 Gma11g01280 11 10921946 10927317 PCT
Gma11g01280 11 10921946 10927317 Gma15g00381 15 3212747 3216557 PCT