Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00299 ATGCATAAACCCGCAGAGGCACTAGACTTTGCTCTCAGGGAGACCTCACCCAACATAGGGGCAGGTGCGGTAATGAGGGACAAGCTTTCCTGCACCTATGACCTGGTTGAACAAATGCAGTACCTCTATGTTAGAGTGGTGAAAGCCAAGGATTTGCCAGGGAAAGATGTTACTGGTGGTGTGGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTCACCAAGCACTTTGAGAAAAAGTCCAATCCTCAGTGGAATCAGGTTTTTGCCTTTTCCAAAGAAAGGATTCAAGCTTCTGTTCTGGAGGTGGTGATCAAAGACAAAGATGTTGTTGTGGATGACTTTGTAGGGAGAGTGATGTTTGATATTAATGAAATCCCAAAACGTGTGCCCCCGGATAGCCCTTTGGCTCCCCAGTGGTACAGGCTGGAAGATAGGAGAGGTGACAAAGCCAAGGGAGAGTTAATGTTAGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAACTGTTGGTCCTGAAGCTGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGGGTCAATGTTATTGAGGCTCAAGACTTGGTACCAAGTGACAAAACCCGGTATCCTGAAGTCTTTGTGAAGGCTAATCTGGGGATCCAGTTTTTAAGAACTAGAGTATCTCAAAGTAAGACCATAAATCCTATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAACCATTTGAGGAGCCCTTGGTTCTGACTGCAGAAGACAGGGTTGGACCAAACAAGGATGAGATCTTGGGAAGGTGTTTGATTCCTTTACACAATGTGCAAAGGAGGTTGGACCACAAGCCCGTGAACACAAAGTGGTTTAATCTTGAAAAGCATGTGGTTGTTGAGGGGGAACAGAAGAAAGAGACCAAGTTCTCAAGTAGGATACATTTGAGGGTTTGCTTGGAAGGTGGCTACCATGTGTTGGATGAATCAACACACTATAGTAGTGATCTTAGGCCAACTGCAAAGCAGCTGGGCAAGGCCAGCATTGGAATTCTGGAAGTGGGGATTATAAGTGCACAAGGGTTGATGCCAATGAAGACAAGAGATGGTAGAGGAACCACAGATGCCTATTGTGTAGCAAAGTATGGGCAAAAGTGGATCCGTACTAGGACAATTGTGGATAGTCTTGCTCCAAGGTGGAATGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTTATCACAGTTGGAGTTTTTGATAATGGTCATTTACATGGGGGAGACAAATCAGGTGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTATCAACTCTTGAAGCTGATAGGGTGTATACATACTCTTATCCTCTTTTGGTACTGTACAATTCAGGTGTGAAGAAAATGGGAGAAGTGCAATTGGCTGTAAGGTTCACAAGCTTATCTTTGATAAACATGCTGTGTATGTATTCACAGCCATTGTTGCCAAAGATGCACTACATTCATCCTCTATCTGTGATTCAGCAAGACAGTCTCAGGCATCAAGCAATCCAGATTGTGTCAATGAGGCTGAGCCGGGCTGAGCCACCACTGAGGAGAGAGGTGGTGGAATACATGCTAGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATTACCAAAGTCCTTGGTGGGTTGATAGCCTTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCTCTCACATCCATACTCATTCATATCCTTTTCATAATACTGGTTCTTTATCCAGAGCTAATACTTCCAACAATTTTCCTTTACCTTTTTATGGTTGGAATTTGGAACTTCCGATGGAGGCCAAGACACCCTCCTCATATGGACACAAGACTATCACATGCTGATGCTGCTCATCCTGATGAACTAGATGAAGAGTTTGACACATTCCCAACTTCACGATCATCGGATATGGTTAGGATGAGGTACGATCGCTTAAGAAGCATTGCAGGGAAGGTCCAAACTGTTGTAGGTGACTTGGCCACTCAAGGAGAAAGGTTCCACAATCTGCTTAGTTGGAGAGACACAAGGGCTACCACTCTCTTTGTTACATTCTGTTTCATTGCTGCAATAGTTCTCTATGTTACTCCCTTCCAAGTTGTGTTCCTTCTAATTGGCTTCTATGTGCTAAGGCACCCCAGATTCCGCCAGAAACATCCTTCAGTCCCATTCAACTACTTCAAGAGGTTGCCTGCTAGAGTAGACAGCATATTGTAA 2325 0.4409 MHKPAEALDFALRETSPNIGAGAVMRDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGGVDPYVEVKLGNYKGLTKHFEKKSNPQWNQVFAFSKERIQASVLEVVIKDKDVVVDDFVGRVMFDINEIPKRVPPDSPLAPQWYRLEDRRGDKAKGELMLAVWMGTQADEAFPDAWHSDAATVGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLVPSDKTRYPEVFVKANLGIQFLRTRVSQSKTINPMWNEDLMFVAAEPFEEPLVLTAEDRVGPNKDEILGRCLIPLHNVQRRLDHKPVNTKWFNLEKHVVVEGEQKKETKFSSRIHLRVCLEGGYHVLDESTHYSSDLRPTAKQLGKASIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSLAPRWNEQYIWEVFDPCTVITVGVFDNGHLHGGDKSGGSKDSRIGKVRIRLSTLEADRVYTYSYPLLVLYNSGVKKMGEVQLAVRFTSLSLINMLCMYSQPLLPKMHYIHPLSVIQQDSLRHQAIQIVSMRLSRAEPPLRREVVEYMLDVDSHMWSMRRSKANFFRITKVLGGLIAFGRWFDQICNWKNPLTSILIHILFIILVLYPELILPTIFLYLFMVGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFIAAIVLYVTPFQVVFLLIGFYVLRHPRFRQKHPSVPFNYFKRLPARVDSIL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00299 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Gma15g00299 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Gma15g00299 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Gma15g00299 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 496 IPR035892 -
Gma15g00299 774 CDD C2B_MCTP_PRT_plant 41 165 - -
Gma15g00299 774 Gene3D C2 domain 187 333 IPR035892 -
Gma15g00299 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 774 - -
Gma15g00299 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Gma15g00299 774 CDD C2C_MCTP_PRT_plant 202 352 - -
Gma15g00299 774 Gene3D C2 domain 31 164 IPR035892 -
Gma15g00299 774 Gene3D C2 domain 361 498 IPR035892 -
Gma15g00299 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Gma15g00299 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Gma15g00299 774 SMART C2_3c 202 300 IPR000008 -
Gma15g00299 774 SMART C2_3c 41 137 IPR000008 -
Gma15g00299 774 SMART C2_3c 364 471 IPR000008 -
Gma15g00299 774 Pfam C2 domain 201 307 IPR000008 -
Gma15g00299 774 Pfam C2 domain 363 474 IPR000008 -
Gma15g00299 774 Pfam C2 domain 41 133 IPR000008 -
Gma15g00299 774 CDD C2D_MCTP_PRT_plant 364 491 - -
Gma15g00299 774 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00299 Gma-Chr15 2607973 2610461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00299 1 774 Lipid Metabolism Gene Families AT3G57880 80.129 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00299 - - gmx:100809753 1529.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00299 15 2607973 2610461 Gma15g00299 15 2607973 2610461 ECH
Gma13g03061 13 44965066 44967393 Gma15g00299 15 2607973 2610461 ECH
Gma13g03061 13 44965066 44967393 Gma15g00299 15 2607973 2610461 GST
Gma15g00299 15 2607973 2610461 Gma11g01183 11 10074012 10085193 PCT
Gma11g01183 11 10074012 10085193 Gma15g00299 15 2607973 2610461 PCT