Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03061 ATGCATAAACCAGCAGAGGCACTAGACTTTGCTCTCAAGGAGACTTCACCCAACATAGGTGCGGGTGCTGTAATGAGGGACAAGCTTTCCTGTACCTATGACCTGGTTGAACAAATGCAGTACCTCTATGTTAGAGTGGTGAAAGCCAAGGATTTGCCAGGGAAAGATGTTACTGGTGGTGTGGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTTACCAAGCACTTTGAGAAAAATTCCAATCCTCAGTGGAATCAGGTTTTTGCCTTCTCCAAAGAAAGGATTCAAGCTTCTGTTCTGGAGGTGGTGATCAAAGACAAGGATGTTGTTGTGGATGACTTCGTAGGGAGAGTGATGTTTGATATTAATGAAATCCCAAAACGTGTGCCTCCAGATAGCCCTTTGGCTCCACAGTGGTACAGGCTAGAAGATAGGAGGGGTGGCAAAGCCAAAGGAGAGTTAATGTTGGCGGTTTGGATGGGAACTCAAGCAGACGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAACTGTTGGTCCTGAAGCTGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGGGTCAATGTTATTGAGGCTCAAGACTTGGTACCAAGTGACAAAACCCGGTATCCTGAAGTCTTTGTGAAGGCTAATCTGGGGGTTCAGTTTTTAAGAACTAGAGTATCTCAAAGTAAAACCATAAATCCAATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAGCCCTTGGTTCTGACTGCAGAGGACAGGGTTGGACCAAGCAAGGATGAGATCCTGGGAAGGTGTGTGATTCCTTTACACAATGTGCAAAGGAGGTTGGACCACAAGCCTGTGAACACAAAGTGGTTTAATCTGGAAAAGCATGTGGTTGTTGAAGGGGAACAGAAGAAGAAGGAGATCAAGTTCTCAAGTAGGATACATCTGAGGGTTTGCTTGGAAGGTGGCTACCATGTGTTGGATGAATCAACACACTATAGTAGTGATCTTAGGCCAACTGCAAAGCAGCTGTGGAAGGCTAGCATTGGAATTCTGGAAGTTGGGATTATAAGTGCACAAGGGTTGATGCCAATGAAGACAAGAGATGGTAGAGGAACCACAGATGCTTATTGTGTAGCAAAATATGGGCAGAAGTGGATCCGTACTAGGACAATTGTGGATAGTCTTGCTCCAAGGTGGAATGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTTATCACAGTTGGGGTTTTTGATAATGGTCACTTACATGGGGGAGACAAATCAGGTGGATCAAAAGATTCAAGAATAGGGAAGGTGAGAATTAGGCTATCCACTCTTGAAGCTGATAGGGTGTACACACACTCTTATCCTCTTTTGGTACTGCACAATTCAGGTGTGAAGAAAATGGGAGAAGTGCAATTGGCTGTAAGATTCACAAGCTTATCTTTGATAAACATGCTGTGTATGTATTCACAGCCATTGTTGCCAAAGTTGCATTACATCCATCCTCTATCTGTGATTCAGCTAGACACTCTTAGGCATCAAGCTATCAAGATTGTGTCAATGAGGTTGAGCAGGGCTGAGCCACCACTGAGGAAAGAGGTGGTGGAATACATGCTAGATGTAGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAACCAAAGTTCTAGGAGGGTTGTTAGCCTTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCTCTCACATCCATACTCATTCATATCCTTTTCATAATACTGGTTCTTTATCCAGAGCTAATACTTCCAACAATTTTCCTTTACCTTTTTTTGGTTGGAATTTGGAATTTCCGATGGAGGCCAAGACACCCTCCTCATATGGACACAAGACTATCACATGCTGATGCTGCTCATCCTGATGAACTAGATGAAGAGTTTGATACATTCCCAACTTCACGATCATCGGATATGGTTAGGATGAGGTATGATCGCTTAAGAAGCATTGCCGGGAAGGTCCAAACTGTTGTAGGTGACTTGGCCACTCAAGGAGAAAGGTTCCATAATCTGCTTAGTTGGAGAGACACAAGGGCTACCACTCTTTTTGTGACATTCTGTTTCATTGCTGCAGTAGTTCTCTATGTCACTCCCTTCCAAGTTGTGTTCCTTCTAATTGGCTTCTATTTGCTAAGGCACCCCAGATTCCGCCAGAAACATCCTTCAGTCCCATTCAACTACTTCAAGAGGTTGCCAGCTAGAGTAGACAGCATATTGTAA 2328 0.4369 MHKPAEALDFALKETSPNIGAGAVMRDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGGVDPYVEVKLGNYKGLTKHFEKNSNPQWNQVFAFSKERIQASVLEVVIKDKDVVVDDFVGRVMFDINEIPKRVPPDSPLAPQWYRLEDRRGGKAKGELMLAVWMGTQADEAFPDAWHSDAATVGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLVPSDKTRYPEVFVKANLGVQFLRTRVSQSKTINPMWNEDLMFVAAEPFEEPLVLTAEDRVGPSKDEILGRCVIPLHNVQRRLDHKPVNTKWFNLEKHVVVEGEQKKKEIKFSSRIHLRVCLEGGYHVLDESTHYSSDLRPTAKQLWKASIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSLAPRWNEQYIWEVFDPCTVITVGVFDNGHLHGGDKSGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHNSGVKKMGEVQLAVRFTSLSLINMLCMYSQPLLPKLHYIHPLSVIQLDTLRHQAIKIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRITKVLGGLLAFGRWFDQICNWKNPLTSILIHILFIILVLYPELILPTIFLYLFLVGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFIAAVVLYVTPFQVVFLLIGFYLLRHPRFRQKHPSVPFNYFKRLPARVDSIL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03061 775 ProSiteProfiles C2 domain profile. 347 473 IPR000008 -
Gma13g03061 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Gma13g03061 775 CDD C2B_MCTP_PRT_plant 41 165 - -
Gma13g03061 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Gma13g03061 775 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Gma13g03061 775 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 775 - -
Gma13g03061 775 Gene3D C2 domain 187 334 IPR035892 -
Gma13g03061 775 Gene3D C2 domain 25 163 IPR035892 -
Gma13g03061 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 497 IPR035892 -
Gma13g03061 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 355 IPR035892 -
Gma13g03061 775 Gene3D C2 domain 362 499 IPR035892 -
Gma13g03061 775 CDD C2D_MCTP_PRT_plant 365 492 - -
Gma13g03061 775 CDD C2C_MCTP_PRT_plant 202 353 - -
Gma13g03061 775 Pfam C2 domain 364 475 IPR000008 -
Gma13g03061 775 Pfam C2 domain 41 133 IPR000008 -
Gma13g03061 775 Pfam C2 domain 201 307 IPR000008 -
Gma13g03061 775 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Gma13g03061 775 SMART C2_3c 41 137 IPR000008 -
Gma13g03061 775 SMART C2_3c 365 472 IPR000008 -
Gma13g03061 775 SMART C2_3c 202 300 IPR000008 -
Gma13g03061 775 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03061 Gma-Chr13 44965066 44967393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03061 1 775 Lipid Metabolism Gene Families AT3G57880 80.155 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03061 - - gmx:100807941 1532.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03061 13 44965066 44967393 Gma13g03061 13 44965066 44967393 ECH
Gma13g03061 13 44965066 44967393 Gma15g00299 15 2607973 2610461 ECH
Gma13g03061 13 44965066 44967393 Gma15g00299 15 2607973 2610461 GST
Gma13g03061 13 44965066 44967393 Gma11g01183 11 10074012 10085193 PCT
Gma11g01183 11 10074012 10085193 Gma13g03061 13 44965066 44967393 PCT