Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00204 ATGATGATGATCAGAGAGGAAAAGGGTGTGAAGCCTGTTCTACTAAAATTTGGTTTGGCTTTGGCTCTTTCATTTGCTGGATTTATCTACTCACGCCTCAGAACCAGAAGAATCAAGCCCTCCAAGTCACGCAAGGGGTGTTCTTTCGGGGCAGCATTAAGTACTTGCAACGCCATTTCAGAGGGAAATTTTCTATGTTCTGAAGAAACATGCATCAACAAGGTGATAAGTGATAAATCTCCCATTTCTCTCTCTCCTGACAGTACACAAAATGGAGATGAAGATGAGTTCCTCCTACCTGAATTTAATGATCTTGTTAAGGACGTAGACTTTGAAGCCACTGTTGTCAGAAATTCTTTTAAAGAAGATATGGGAGCAGCATGGTTAAAAGTAGGATCTTCTATAGCATATTCTGGTCCCGAGAAGGATGACTATGAGCAAGAGGTACGTCAACTCAGGAACATGATTAGAATGCTTCAAGACAGGGAACAAAGTCTTGAGGTTCAACTGCTTGAGTTCTGTGGTCTTAGAGAGCAAGAAACAGCAGTGATGGAGCTCCAAAATAGATTGAAAGCAAGTACCATGGAGGTAAAGATCTTCAATCTAAAGGTTAAGACCTTACAGTCTGAGAATTGGAGATTAAAGGAACAGGTTGCTGATCATGAAAAAGTGCTGACTGAGCTTGAGAATGCAAAAGCGCAAGTCGAATTGCTCAATAAGAAAATTAGGCATGAAACTGAACAGAATAGGGAGAAGATCATAACTCTTAAACAGAAAGTTTCAAGGTTGCAAGACCAAGAATGCAAAGATGCTGCTTATGATCAAGATATTCAAATAAAGATGCAAAAGCTAAAGTATCTTGAGTCTGAAGCAGAAGAGTTGAGGAAATCTAATTTAAGATTGCAGATAGAAAATTCTGACTTAGCTCGAAGATTGGATTCTACCCAGATCCTTGCAAATGCATTTCTGGAAGACCCAGAGGCAGGTGCTGTGAAGCAAGAAAGTGAGTGTCTTAAACAAGAAAATGTGCGCTTGATGAAGGAAATTGAGCAATTTCAGTCTGATCGATGTTCAGATCTTGAAGAATTGGTATATCTGCGGTGGATAAATGCTTGCTTGCGATATGAACTAAGAAATTATCAAGCCCCACCTGGTAAAACAGTTGCAAAGGACTTAAGCAGAAGCTTAAGCCCTATGTCTGAGAAGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTAATGGACCAGGGAACATTGTGGACTTTGATATAGACCAATGGTCCTCCTCACAGGCTTCTTCTATCACTGACTTTGGAGAGTGTGATGATTTTTCTTCTGCTGATAATTCATCTGCTGCCAGAACTAACACAAACCCGACCAAACTTTTTGGCAAGCTCAGGCAACTGATACAAGGTGATTCCGCAGGCATGTGCTTATGA 1443 0.4047 MMMIREEKGVKPVLLKFGLALALSFAGFIYSRLRTRRIKPSKSRKGCSFGAALSTCNAISEGNFLCSEETCINKVISDKSPISLSPDSTQNGDEDEFLLPEFNDLVKDVDFEATVVRNSFKEDMGAAWLKVGSSIAYSGPEKDDYEQEVRQLRNMIRMLQDREQSLEVQLLEFCGLREQETAVMELQNRLKASTMEVKIFNLKVKTLQSENWRLKEQVADHEKVLTELENAKAQVELLNKKIRHETEQNREKIITLKQKVSRLQDQECKDAAYDQDIQIKMQKLKYLESEAEELRKSNLRLQIENSDLARRLDSTQILANAFLEDPEAGAVKQESECLKQENVRLMKEIEQFQSDRCSDLEELVYLRWINACLRYELRNYQAPPGKTVAKDLSRSLSPMSEKKAKQLILEYANANGPGNIVDFDIDQWSSSQASSITDFGECDDFSSADNSSAARTNTNPTKLFGKLRQLIQGDSAGMCL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00204 480 Coils Coil 204 266 - -
Gma15g00204 480 Coils Coil 335 355 - -
Gma15g00204 480 Coils Coil 176 196 - -
Gma15g00204 480 Coils Coil 142 169 - -
Gma15g00204 480 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 3 475 IPR040265 -
Gma15g00204 480 PANTHER ACTIN BINDING PROTEIN FAMILY 3 475 - -
Gma15g00204 480 Coils Coil 277 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00204 Gma-Chr15 1660148 1663447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00204 - - gmx:100819899 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00204 15 1660148 1663447 Gma15g00204 15 1660148 1663447 ECH
Gma13g03162 13 45756839 45760254 Gma15g00204 15 1660148 1663447 GST
Gma15g00204 15 1660148 1663447 Gma07g00136 07 1134096 1135417 PCT
Gma15g00204 15 1660148 1663447 Gma08g01831 08 16417725 16420732 PCT
Gma07g00136 07 1134096 1135417 Gma15g00204 15 1660148 1663447 PCT
Gma08g01831 08 16417725 16420732 Gma15g00204 15 1660148 1663447 PCT