Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03162 ATGGACTTTGGAGCCATCATTGTCAGAAATTCTTTTAAAGAAGATATGGAAGCACCATGGTTAAAAGTAGGATCTTCTATAGCATATGCTAGTCCCGAGAAGGACGACTATGAGCAAGAGATAAGTCAACTCAGGAGCATGATTAGAATGCTTCAAGACAGGGGGCGAAGTCTTGAGGTTCAACTGCTTGAGTACTGTCGTCTTAGAGAGCAAGAAACAGCAGTGATAGAGCTCCAAAATAGATTGAAAGCAAGTACCATGGAGGTAAAGATCTTCAATCTAAAGGTTAAGACCTTACAGTCTGAGAATTGGAGATTGAAGGAACAGGTTGCTGGTCATGCAAAAGTGCTGGCTGAGCTGGAGACTGCAAAAGCGCAAGTCAAATTGCTCAATAAGAAAATTAGGCACGAAGCTGAACATAATAGGGAGCAGATCATAACTCTTAAGCAGAAAGTTTCCAGGTTGCAAGACCAAGAATGTAAAGATGTTGCTTGTGATCCAGATATTCAAATAACGATGCAAAAGCAAAAGGATCTTGAGTCTGAAGCAGAAGAGTTGAGGAAATCTAATTTAAGATTGCAGATAGAAAATTCTGACTTAGCTCGAAGATTGGATTCTACCCAGATCCTTGCAAATGCATTTCTGGAAGACCCAGCGGCAGATGCAGTGAAGCAAGAAAGCGAGTGTCTTAAACAAGAAAATGTGCGCTTGATGAAAGAAATCGAGCAACTACAGTCTGATCGATGTTCAGATCTTGAAGAATTAGTATATATGCGGTGGATAAATGCTTGCCTACGATATGAACTAAGAAATTATCAAGCCCCACTAGGTAAAACAGTTGCAAAGGACTTAAGCAGAAGCTTAAGCCCTACGTCTGAGAAGAAAGCCAAGCAGCTTATACTTGAATATGCAAATACTGATGTACCAGGGAACATTGTGGACTTTGATATAGACCAATGGTCCTCCTCACAGGCTTCTTCTATCACTGACTTCGGAGAGTGTGATGATTTTTCTTCTGTTGATAATTCATCTGCTGCCAGAACTAACACAAACCAGACCAAACTTTTTGGCAAGCTCAGGCATCTGATACAAGGTAAAGGTAGTAGTCATCACCACAGTCATGTTTCATCACAAGAAAAATCTGGATATCAAGTTAGCAATCCTCCTCATTTGAGCACATCAACCGGAACTGAGGGTCTTAGGAGTGAGTTTGCAACTCCCATTGGCACCTCTAGAACCTCCCTTGATTTCTCTAGTTTGACGAGTGTGAAGGAAGGTGATAGGAGAAATTCAGATAGCATTGTTGTGGGAAGCTCAAATAAATTCAGTGCATGTAAAAAAGGTTCCTTCTCAGATTCCTTAGGCTTGGAAAACAATAATTTGGAGAAATATGCAGAAGCTTTAAAAGATTCTAGTGTGAGTGCTACACATGAAAGATGTAGAAGATCAGCATCATGTAGTTAG 1464 0.4051 MDFGAIIVRNSFKEDMEAPWLKVGSSIAYASPEKDDYEQEISQLRSMIRMLQDRGRSLEVQLLEYCRLREQETAVIELQNRLKASTMEVKIFNLKVKTLQSENWRLKEQVAGHAKVLAELETAKAQVKLLNKKIRHEAEHNREQIITLKQKVSRLQDQECKDVACDPDIQITMQKQKDLESEAEELRKSNLRLQIENSDLARRLDSTQILANAFLEDPAADAVKQESECLKQENVRLMKEIEQLQSDRCSDLEELVYMRWINACLRYELRNYQAPLGKTVAKDLSRSLSPTSEKKAKQLILEYANTDVPGNIVDFDIDQWSSSQASSITDFGECDDFSSVDNSSAARTNTNQTKLFGKLRHLIQGKGSSHHHSHVSSQEKSGYQVSNPPHLSTSTGTEGLRSEFATPIGTSRTSLDFSSLTSVKEGDRRNSDSIVVGSSNKFSACKKGSFSDSLGLENNNLEKYAEALKDSSVSATHERCRRSASCS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03162 487 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 25 487 IPR040265 -
Gma13g03162 487 Coils Coil 68 88 - -
Gma13g03162 487 MobiDBLite consensus disorder prediction 367 398 - -
Gma13g03162 487 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 25 487 - -
Gma13g03162 487 Coils Coil 113 158 - -
Gma13g03162 487 Coils Coil 34 54 - -
Gma13g03162 487 Coils Coil 169 203 - -
Gma13g03162 487 Coils Coil 220 247 - -
Gma13g03162 487 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03162 Gma-Chr13 45756839 45760254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03162 - - gmx:100796238 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03162 13 45756839 45760254 Gma13g03162 13 45756839 45760254 ECH
Gma13g03162 13 45756839 45760254 Gma15g00204 15 1660148 1663447 GST
Gma13g03162 13 45756839 45760254 Gma07g00136 07 1134096 1135417 PCT
Gma13g03162 13 45756839 45760254 Gma08g01831 08 16417725 16420732 PCT
Gma07g00136 07 1134096 1135417 Gma13g03162 13 45756839 45760254 PCT
Gma08g01831 08 16417725 16420732 Gma13g03162 13 45756839 45760254 PCT