Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00109 ATGTGGCGGAGACTCTTCTCTTCTTCAAACCTCAAATCCCTACACACAGCACTCTCTCCTTCTCGTCCCCGACTCGCCGCCCCTCTCCTCACCCGCCACGTGACCGCTCATTCAGGTGCTTCTTCCGTCAAAAGGAGGGTTGAAGATGTCGTGCCAATTGCTACCGGCCACGAGCGTGAGGAGATTCAGGCTGATCTTGAGGGAAGGGATATTCTTGAAATAAACCATCCCGTCGGCCCTTTTGGCACAAAGGAAGCACCTGCTGTTGTTAAATCTTACTTTGACAGAAGGATAGTTGGATGCCCAGGAGATGAAGGCGAAGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTAAAGAATGTCCAGTGTGCTCACAGTATTTTAAGCTCGAAGTGGTCGGACCTGGTGGTGATCCTTATGGACATGGAGATCATGATCACCATTGA 459 0.5054 MWRRLFSSSNLKSLHTALSPSRPRLAAPLLTRHVTAHSGASSVKRRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWLEKGKPKECPVCSQYFKLEVVGPGGDPYGHGDHDHH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00109 152 Gene3D Cytochrome c oxidase, subunit Vb 44 137 IPR036972 GO:0005740|GO:0005751|GO:0006123
Gma15g00109 152 CDD Cyt_c_Oxidase_Vb 42 139 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma15g00109 152 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma15g00109 152 SUPERFAMILY Rubredoxin-like 43 140 - -
Gma15g00109 152 Pfam Cytochrome c oxidase subunit Vb 54 142 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma15g00109 152 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 41 141 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma15g00109 152 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00109 Gma-Chr15 844624 847755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00109 K02265 - gmx:100801050 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03247 13 46548851 46550837 Gma15g00109 15 844624 847755 ECH
Gma15g00109 15 844624 847755 Gma15g00109 15 844624 847755 ECH
Gma13g03247 13 46548851 46550837 Gma15g00109 15 844624 847755 GST
Gma15g00109 15 844624 847755 Gma07g00306 07 2614895 2618895 PCT
Gma15g00109 15 844624 847755 Gma08g01921 08 17282415 17285961 PCT
Gma07g00306 07 2614895 2618895 Gma15g00109 15 844624 847755 PCT
Gma08g01921 08 17282415 17285961 Gma15g00109 15 844624 847755 PCT