Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03247 ATGTGGCGGAGACTCTTCTCTTCTTCAAACCTCAAAGCCCTACACACAACACTCTCTCCTTCTCGTCCCCGACTCGCCGCCCAGACTCTCCTCGCCCGCCACTTCACCGCCCAATCAGGTTTTCCTTCTCTCCATTTCCCCTATATATTGAATTGCTCGTTTCTTAATTCAATTTCGTTCTTGTTATCTCAATCAGGTGCTTCTTCCCTCAAAAAGAGGGTTGAAGATGTCGTGCCAATTGCTACCGGCCACGAGCGTGAGGAGATTCAGGCCGATCTCGAGGGAAGGGATATTCTTGAAATAAACCATCCCGTAGGTCCTTTTGGCACAAAGGAAGCACCTGCTGTTGTTAAATCTTACTTTGACAGAAGGATAGTTGGATGCCCAGGAGATGAAGGTGAAGGTGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTATAGAATGCCCAGTGTGCTCACAGTATTTTAAGTTGGAAGTGGTCGGCCCTGGTGGCGATCCTTATGGACATGGCGATCACGATCACCACTGA 540 0.4889 MWRRLFSSSNLKALHTTLSPSRPRLAAQTLLARHFTAQSGFPSLHFPYILNCSFLNSISFLLSQSGASSLKKRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEGEHDVVWFWLEKGKPIECPVCSQYFKLEVVGPGGDPYGHGDHDHH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03247 179 Pfam Cytochrome c oxidase subunit Vb 81 169 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma13g03247 179 CDD Cyt_c_Oxidase_Vb 69 166 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma13g03247 179 Gene3D Cytochrome c oxidase, subunit Vb 71 164 IPR036972 GO:0005740|GO:0005751|GO:0006123
Gma13g03247 179 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 69 168 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma13g03247 179 SUPERFAMILY Rubredoxin-like 70 167 - -
Gma13g03247 179 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 56 179 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma13g03247 179 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 44 IPR002124 GO:0005740|GO:0005751|GO:0006123
Gma13g03247 179 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 44 - -
Gma13g03247 179 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 56 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03247 Gma-Chr13 46548851 46550837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03247 K02265 - gmx:100527520 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03247 13 46548851 46550837 Gma15g00109 15 844624 847755 ECH
Gma13g03247 13 46548851 46550837 Gma13g03247 13 46548851 46550837 ECH
Gma13g03247 13 46548851 46550837 Gma15g00109 15 844624 847755 GST
Gma13g03247 13 46548851 46550837 Gma07g00306 07 2614895 2618895 PCT
Gma13g03247 13 46548851 46550837 Gma08g01921 08 17282415 17285961 PCT
Gma07g00306 07 2614895 2618895 Gma13g03247 13 46548851 46550837 PCT
Gma08g01921 08 17282415 17285961 Gma13g03247 13 46548851 46550837 PCT