Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00080 ATGCTCTCTGTTGGCAGCTCCTCTCTATCGGCGTGGAAAAGAAGAAGAAACAGAAGAGAGTCGAAAACGGCAGTCCCCTCCCTCATCGGAAGGGAGGAACACAGCCAACCACGACAGGATTACTCCCTGGAATCGGGTTCTGTCTTCTTCATTGCAGCAGATCTCACTACACTGCATGCATATGGGAGCAGTGGTTGTCTTGGACCCTTTAAAAAGCCCCCACTAATTGCTACTGCAGATGTTCCGCCAAAAGGATTGAGGAAACAAGGTAAGGCAGCAAAGAAACCTAGCACATCAGAAGATTTCTGGATCACCAGCACGCATGATATGGACAACAGTGCTGTTCAGTCACAGGGAAGCATCTCATCAGCCAGTATAACAAACCAAGCTGCAGATCCTCATGGAGGTTCATGCAACCCCACTGAGTTTGTGAATCATGGTCTTATTCTATGGAATCAGACACGGCAAGGTTGGATAGGAAATAAACGGTCTAAGAACCAAACTGAACAGTTGCGAGAACCCAAATTGAGTTGGAATGCAACATATGAAAGTTTACTGGGGAGCAACAAGCCATTCCCTCAGCATATTCCCCTTGCGGAAATGGTTGATTTTCTTGTGGACATCTGGGAACAAGAGGATCTAAACTTCTCGTCACTGATGGCTCCACAAGGCAGAATCTACCCACAGCATGGATCCAAAGTTACTATTACTGTAGCCTTCTTTTTTTATCTCATTGTTCTACTGCCCAAATCAGATGCAGGTGGATCCAGCGAGAGTGTGGAGGGAAGCAAAGTGGTGATAGGGTCAAAGCCTCCTGCTTGTGGAAACAAGTGCATGAGCTGCAGGCCTTGCATAGCAACTGTGGTCGTTCCTAATCACAAAAGGAAGGGTTTCAACTTCAAATTCAATGGAGTCGACGATGATAGCTATTACCTCCTTTCATGGAAATGCAGGTGTGGGGATAAGTTGTTTCAACCATAA 981 0.4628 MLSVGSSSLSAWKRRRNRRESKTAVPSLIGREEHSQPRQDYSLESGSVFFIAADLTTLHAYGSSGCLGPFKKPPLIATADVPPKGLRKQGKAAKKPSTSEDFWITSTHDMDNSAVQSQGSISSASITNQAADPHGGSCNPTEFVNHGLILWNQTRQGWIGNKRSKNQTEQLREPKLSWNATYESLLGSNKPFPQHIPLAEMVDFLVDIWEQEDLNFSSLMAPQGRIYPQHGSKVTITVAFFFYLIVLLPKSDAGGSSESVEGSKVVIGSKPPACGNKCMSCRPCIATVVVPNHKRKGFNFKFNGVDDDSYYLLSWKCRCGDKLFQP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00080 326 MobiDBLite consensus disorder prediction 21 39 - -
Gma15g00080 326 MobiDBLite consensus disorder prediction 1 40 - -
Gma15g00080 326 Pfam Protein of unknown function (DUF4050) 175 213 IPR025124 -
Gma15g00080 326 Pfam Protein of unknown function (DUF4050) 106 174 IPR025124 -
Gma15g00080 326 Pfam Epidermal patterning factor proteins 266 326 - -
Gma15g00080 326 PANTHER DUF4050 FAMILY PROTEIN 59 214 - -
Gma15g00080 326 PANTHER OS07G0479600 PROTEIN 59 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00080 Gma-Chr15 667213 675927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00080 - - gmx:100802439 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03271 13 46696566 46699732 Gma15g00080 15 667213 675927 ECH
Gma17g01073 17 9216902 9227117 Gma15g00080 15 667213 675927 ECH
Gma13g01468 13 29413753 29417069 Gma15g00080 15 667213 675927 ECH
Gma15g00080 15 667213 675927 Gma07g00288 07 2488556 2492967 ECH
Gma15g00080 15 667213 675927 Gma08g01941 08 17414650 17420850 ECH
Gma15g00080 15 667213 675927 Gma13g03271 13 46696566 46699732 ECH
Gma15g00080 15 667213 675927 Gma15g00080 15 667213 675927 ECH
Gma15g00080 15 667213 675927 Gma17g02006 17 35967741 35974174 ECH
Gma15g00080 15 667213 675927 Gma04g00622 04 5688138 5691150 ECH
Gma15g00080 15 667213 675927 Gma06g00607 06 5507541 5511493 ECH
Gma13g03271 13 46696566 46699732 Gma15g00080 15 667213 675927 GST
Gma15g00080 15 667213 675927 Gma07g00288 07 2488556 2492967 PCT
Gma15g00080 15 667213 675927 Gma08g01941 08 17414650 17420850 PCT
Gma07g00288 07 2488556 2492967 Gma15g00080 15 667213 675927 PCT
Gma08g01941 08 17414650 17420850 Gma15g00080 15 667213 675927 PCT