Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02104 ATGGCTGAAGATCCTCAAGACGTAGCCGATAGGGAGCGAATTTTCAAGCGTTTTGACGCCAATGGCGATGGCCAAATCTCTTCAGCTGAGCTTGGGGAAGCACTCAAGGCCCTTGGATCAGTCACAGCAGAAGAGGTGAAAAGGATGATGGAAGAGATTGACACTGATGGAGATGGCTACATTTCATATCAAGAGTTCACAGAATTCGCCAAAGCCAACCGTGGCCTAGTCAAAGATGTTGCCAAGATTTTTTAA 255 0.4667 MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGYISYQEFTEFAKANRGLVKDVAKIF 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02104 84 SMART efh_1 10 38 IPR002048 GO:0005509
Gma14g02104 84 SMART efh_1 45 73 IPR002048 GO:0005509
Gma14g02104 84 ProSitePatterns EF-hand calcium-binding domain. 54 66 IPR018247 -
Gma14g02104 84 Gene3D - 2 84 - -
Gma14g02104 84 PANTHER POLCALCIN NIC T 1 1 84 - -
Gma14g02104 84 ProSiteProfiles EF-hand calcium-binding domain profile. 44 76 IPR002048 GO:0005509
Gma14g02104 84 SUPERFAMILY EF-hand 8 70 IPR011992 -
Gma14g02104 84 CDD EFh 12 71 IPR002048 GO:0005509
Gma14g02104 84 PANTHER TROPONIN 1 84 - -
Gma14g02104 84 Pfam EF-hand domain pair 13 70 IPR002048 GO:0005509
Gma14g02104 84 ProSitePatterns EF-hand calcium-binding domain. 19 31 IPR018247 -
Gma14g02104 84 ProSiteProfiles EF-hand calcium-binding domain profile. 6 41 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02104 Gma-Chr14 52134003 52134257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02104 4 84 EF-hand Containing Proteins AT3G03430 75.309 3.28e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02104 K13448 - gmx:100806709 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02104 14 52134003 52134257 Gma02g02325 02 49346625 49346879 GST
Gma11g02200 11 37230589 37230897 Gma14g02104 14 52134003 52134257 PCT
Gma14g02104 14 52134003 52134257 Gma11g02200 11 37230589 37230897 PCT