Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01842 ATGGGTACTGGTTGGAGAAGAGCCTTTTGCACTAGCGACCCAGATAATTCCCCAATACGCACCAAAGACAGAACCCTAAGTCCTACTCCTTCCCCCAGAAGCTGTGTCAGCCTGGGCTTCCTCTCCACACCATCACTGcaccatcaccaccaccaccaccaccaccaccaACAACCCCTCTCTTCAACTCCAAAAAGTTCAACAATCACAGAACCACCAAATGACAGCCCCAGATTTCAAACCAAAACCCATAAGTCAAACCCAAATTCTCCTCTCTCCCCTAAGCTCAACCTCTCCCTCTTCAGAAACAGCTTCAAATTTAGAAATAGTTGCGGAATCTGTTCGAATAGCGTGAAGACAGGGCAGGGAACGGCCATTTACACTGCTGAGTGCGGTCACGCGTTTCACTTCCCCTGCGTCGTTTCCCATGCACACATCCACGTCTGTCCCGTATGCGACGCCACGTGGAACGACGTGCCGCTTCTACAAAACGACGCCGTCGTTCACACCGAGAAACAAAATCAACCGAGTCATCATCATCATCATCGTTCCGATTCCGTCACCTCCTACGACGACGACGAGCCTCTCCCTTCTCCTCTCACATGCTCCACACAAATCGCTCCGATCCCCGAAGATGAAGAAAACGACGACGTATCCGAGTTCCCTGGCTTTTTCGTCGATCCAAAGCCTCAATCCTCGTTGCGACAAAACAACGGTGGTGATTCGAGGAGTGTTCGAGTGAAGCTGATGCCGGAGTGCCCGGTCATATCAGTATCGGAAAGCCACGAAACTCGTGCTTTGGTGTTGAGAGTGAAGGCTCCGCCGTCGCCGCCGAGATGGCGGCGGCGGGAGCCGATGGATCTCGTGACGGTGCTTGACGTTAATAACAGCATGAGCGGCGCGAACTTTCACATGCTAAAGCGCGCCATGCGTTTGGTTATATCGTCACTCGGCCCGGCTGACCGGCTCGCCGTCGTGGCTTCCTCGGCTAATTCCAAACGGTTGTTACCTCTGAGGAGAATGACGGCTCAGGGACAACGCGCGGCGCGGCGCGTCGTGGATCGGCTCGTGTGTGACCATGGAAACAGCGTTGGTGAAGAAGCGATGAAGAAAGCCGCTAAGGTTCTCGAAGATCGGAGAGAGAGAAACCCTCTCGTTAGGATCTTGCTCTTATCAGACGGTCACGACGAGAACAACAACAAAAATCAACGGAGATTCTTAAGCCACATGTCTTCTTCCATCCGGTTCGATTGCATCGAAGTTCCGGTTCATTCGTCTGGGTTCGAGACGAAAAAAACCGGTTTAATACACGAACCGTTAGAAGATGATTTTGCACAATATATTAACAGGACATTGAGTGTGGCGGTGCATGATTTAAGAATTCAGCTTGGCTTCTCCGCGCCGGCTGAAATCCGAGCCGTTTATTCATGCAGTGGGGGACCCACTGCGCTGAGCTCAAACTCAGCTCGGCTTGGTGATTTATACGCTGAAGAGGAGAAGGAGTTGTTGGTGGAGGTTAGAGTGCCCACGTCAGCATCAGGGACCCACCATGTGATGACAGTGCGGTGTGTTAAAAAAGACCCTGTGTCTCAAGAGTTTGTATACGGTGCGGAACACGCGTTTACGGTGGTGCCACCAAAGAGTATTCCAATTTGTGGCGGTAGGGTGGAGCGGCTGAGGAATGTGTTTATAACGAGCCGAGCTGTAGCCGAGTCGAGGAGGCTGGCGAAGCACAACGAGTTTTCGAGTGCTCATCATTTGCTCGCTTCGGCTCGGGCGCTTCTGACTCAGTTCGGCTCGGCTGAAGAATACGTGCGTGGCTTGGAAGCCGAGCTAACTGAGCTTAATTGGCGGATGCAGCAGCTACGTGTTGAGAGGGAGGTGAGGTTGGTGGATGAGAGTGGTGAGGTTATAACGCCCACGTCGGCTTGGAGAGCCGCTGAAAAGCTGGCTAAGATGGCTAGGATGAAGAAGTCGTTGAACAAAGTTAGCGACTTGCACGGCTTCGAGAATGCTAGGTTTTAA 2025 0.5156 MGTGWRRAFCTSDPDNSPIRTKDRTLSPTPSPRSCVSLGFLSTPSLHHHHHHHHHHQQPLSSTPKSSTITEPPNDSPRFQTKTHKSNPNSPLSPKLNLSLFRNSFKFRNSCGICSNSVKTGQGTAIYTAECGHAFHFPCVVSHAHIHVCPVCDATWNDVPLLQNDAVVHTEKQNQPSHHHHHRSDSVTSYDDDEPLPSPLTCSTQIAPIPEDEENDDVSEFPGFFVDPKPQSSLRQNNGGDSRSVRVKLMPECPVISVSESHETRALVLRVKAPPSPPRWRRREPMDLVTVLDVNNSMSGANFHMLKRAMRLVISSLGPADRLAVVASSANSKRLLPLRRMTAQGQRAARRVVDRLVCDHGNSVGEEAMKKAAKVLEDRRERNPLVRILLLSDGHDENNNKNQRRFLSHMSSSIRFDCIEVPVHSSGFETKKTGLIHEPLEDDFAQYINRTLSVAVHDLRIQLGFSAPAEIRAVYSCSGGPTALSSNSARLGDLYAEEEKELLVEVRVPTSASGTHHVMTVRCVKKDPVSQEFVYGAEHAFTVVPPKSIPICGGRVERLRNVFITSRAVAESRRLAKHNEFSSAHHLLASARALLTQFGSAEEYVRGLEAELTELNWRMQQLRVEREVRLVDESGEVITPTSAWRAAEKLAKMARMKKSLNKVSDLHGFENARF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01842 674 Pfam RING-like zinc finger 111 140 IPR001841 -
Gma14g01842 674 Gene3D von Willebrand factor, type A domain 287 442 IPR036465 -
Gma14g01842 674 MobiDBLite consensus disorder prediction 45 59 - -
Gma14g01842 674 Coils Coil 605 625 - -
Gma14g01842 674 SMART VWA_4 285 452 IPR002035 -
Gma14g01842 674 MobiDBLite consensus disorder prediction 1 33 - -
Gma14g01842 674 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 674 - -
Gma14g01842 674 SUPERFAMILY vWA-like 283 403 IPR036465 -
Gma14g01842 674 Pfam von Willebrand factor type A domain 288 395 IPR002035 -
Gma14g01842 674 CDD RING-H2 111 152 - -
Gma14g01842 674 ProSiteProfiles VWFA domain profile. 287 428 IPR002035 -
Gma14g01842 674 MobiDBLite consensus disorder prediction 45 95 - -
Gma14g01842 674 MobiDBLite consensus disorder prediction 171 242 - -
Gma14g01842 674 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 165 IPR013083 -
Gma14g01842 674 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Gma14g01842 674 SUPERFAMILY RING/U-box 104 164 - -
Gma14g01842 674 SMART ring_2 111 152 IPR001841 -
Gma14g01842 674 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 674 - -
Gma14g01842 674 MobiDBLite consensus disorder prediction 60 95 - -
Gma14g01842 674 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01842 Gma-Chr14 49047736 49050287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01842 - - gmx:100795015 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01842 14 49047736 49050287 Gma14g01842 14 49047736 49050287 ECH
Gma14g01842 14 49047736 49050287 Gma02g02071 02 46444564 46446890 GST