Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01833 ATGGCTTCTTTCCTTTCCTCTGTTGTCACTGCAACTCTCAAGCTCCACCCACAATTCCCAAAATACCCAATATACCCACCAAGCTCCTATCCCCCAGAGAAGGGTCAAAGCATTTCTTTCCAGAAAAGCCACAGATTCACACATTTGGATTTTGGGGAAACACTTTTGTTGACCAAAGAGGGGACAGAGGAGGAGGAAAAATTGTTCTATGTTCCCTTGTTGCAACAATGCTTAGACACGCGCTCCTATTCAGAAACACAAATTGTTCATGGTCATGTCATGAAAACAGGTTGCCATGATAATTTTTTTGTCATGTCATTTCTGGTCAATGTTTATGCCAAATGTGGGAACATGGAGGATGCTCGCAGGGTGTTTGACAACATGCTTAGAAGAAACGTGGTGGCATGGACCACGTTAATGGTGGGTTTTGTGCAGAACTCACAGCCAAAGCACGCCATTCATGTGTTTCAAGAGATGTTGTATGCAGGAAGTTACCCTTCAGTTTATACTCTTTCTGCTGTTCTACATGCTTGTAGTTCTTTGCAGTCTCTCAAGTTAGGAGATCAATTCCATGCTTACATAATCAAATACCATGTTGACTTTGACGCCAGTGTTGGCAGTGCACTTTGTAGTTTATACTCCAAATGTGGCAGGTTGGAGGATGCTCTTAAAACATTTAGTAGAATCAGAGAAAAGAATGTTATTTCATGGACTTCAGCTGTTTCTGCTTGTGCGGACAATGGTGCACCTGTGAAGGGGTTGAGACTTTTTGTTGAGATGATTGCTGTGGACATAAAGCCTAATGAGTTCACTTTGACCAGTGCCTTGAGCCAGTGTTGTGAAATCCTGTCTTTGGAACTTGGAACTCAGGTTTATTCGTTGTGCATTAAATTTGGCTATGAATCAAACCTACGTGTTAGAAATTCTTTGTTGTATTTGTACCTCAAAAGTGGTTGTATTGTTGAGGCTCATAGGTTGTTTAATAGAATGGATGATGCCAGTATGGTTACATGGAATGCAATGATTGCCGGGCATGCGCAGATGATGGAACTCACAAAGGATAATCTTTCTGCATGCCATAGAGGAAGTGAAGCACTGAAACTTTTCTCCAAGTTGAATCTATCAGGCATGAAACCTGATCTGTTTACCTTATCTAGTGTCTTAAGTGTATGTAGTAGAATGCTGGCTATAGAGCAGGGGGAACAAATTCATGCGCAGACTATCAAAACTGGATTCTTATCGGATGTGATTGTAAGTACTTCACTGATTAGTATGTACAGTAAGTGTGGAAGCATTGAGAGGGCTAGCAAAGCATTTCTGGAGATGTCTACTAGAACTATGATAGCATGGACTTCTATGATTACAGGTTTTTCACAGCATGGTATGTCACAACAAGCATTGCATATTTTTGAGGATATGAGCCTAGCAGGAGTTAGACCAAATGCGGTCACTTTTGTGGGTGTTTTATCAGCATGTAGCCATGCTGGCATGGTCAGTCAAGCACTCAACTACTTTGAGATTATGCAAAAGAAATATAAAATTAAGCCTGCTATGGACCACTATGAATGCATGGTTGATATGTTTGTGAGGTTAGGTCGGCTGGAGCAAGCTCTGAATTTCATTAAGAAAATGAATTATGAGCCTAGTGAGTTTATTTGGTCAAACTTTATTGCTGGTTGTAAAAGCCACGGGAATCTGGAATTGGGGTTTTATGCTGCTGAACAGTTACTAAGTCTCAAACCAAAAGATCCAGAGACTTATGTATTGTTGTTGAATATGTACCTCTCAGCTGAGCGTTTTGAGGATGTTTCAAGGGTGAGGAAGATGATGGAAGAGGAGAAAGTTGGAAAGTTGAAGGATTGGAGCTGGATTAGCATTAAAGACAAAGTGTATTCCTTCAAAACCAATGGAAAAACACACCCACAGAGTTCTCTAATATGTAAATCATTGGAGGATTTACTTGCCAAAGTAAAGAATGTAGGATATGAGATGCTAGAAAGTGTGGAAATAAGTGATGAAGAGGAGGAGGAGGAAAAGACATCATCCCCTAACATTTATCACAGCGAGAAGCTGGCCATTACATTTGGGTTGGAGAACTTGCCAAATTCTTCTCCAATAAGAGTTGTCAAGAGCACCTTAATATGCAGGGATAGCCATAACTTTATTAAGTATGTCTCAACACTAGCCGGTAGGGAAATCATCGTTAAAGATAGTAAGCGGCTTCACAAATTTGCCAATGGAGAATGCTCATGTGGAAATTTTGGCGGTTTTCTCTAA 2277 0.4058 MASFLSSVVTATLKLHPQFPKYPIYPPSSYPPEKGQSISFQKSHRFTHLDFGETLLLTKEGTEEEEKLFYVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGNFGGFL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01833 758 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 62 692 - -
Gma14g01833 758 Pfam PPR repeat 235 261 IPR002885 -
Gma14g01833 758 Pfam PPR repeat 521 544 IPR002885 -
Gma14g01833 758 Pfam PPR repeat 308 331 IPR002885 -
Gma14g01833 758 Pfam PPR repeat 211 234 IPR002885 -
Gma14g01833 758 Pfam PPR repeat 420 443 IPR002885 -
Gma14g01833 758 SUPERFAMILY TPR-like 102 602 IPR011990 GO:0005515
Gma14g01833 758 TIGRFAM PPR: pentatricopeptide repeat domain 108 134 IPR002885 -
Gma14g01833 758 TIGRFAM PPR: pentatricopeptide repeat domain 134 167 IPR002885 -
Gma14g01833 758 TIGRFAM PPR: pentatricopeptide repeat domain 449 482 IPR002885 -
Gma14g01833 758 Pfam E motif 563 624 IPR046848 -
Gma14g01833 758 PANTHER OS01G0913400 PROTEIN-RELATED 62 692 - -
Gma14g01833 758 Pfam DYW family of nucleic acid deaminases 675 754 IPR032867 GO:0008270
Gma14g01833 758 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 101 135 IPR002885 -
Gma14g01833 758 Gene3D Tetratricopeptide repeat domain 286 400 IPR011990 GO:0005515
Gma14g01833 758 Gene3D Tetratricopeptide repeat domain 185 285 IPR011990 GO:0005515
Gma14g01833 758 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 446 480 IPR002885 -
Gma14g01833 758 Pfam PPR repeat family 131 179 IPR002885 -
Gma14g01833 758 Pfam PPR repeat family 448 493 IPR002885 -
Gma14g01833 758 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 233 267 IPR002885 -
Gma14g01833 758 Gene3D Tetratricopeptide repeat domain 463 676 IPR011990 GO:0005515
Gma14g01833 758 Gene3D Tetratricopeptide repeat domain 66 184 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01833 Gma-Chr14 48872003 48875248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01833 70 754 Glycoside Hydrolase AT3G49170 35.591 2.37e-150 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01833 - - gmx:100791867 1469.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01833 14 48872003 48875248 Gma14g01833 14 48872003 48875248 ECH
Gma14g01833 14 48872003 48875248 Gma02g02061 02 46286251 46289291 GST