Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01832 ATGGCCATGGCTCTTCGCAGACTCAACAAACCTTTCTCCAACGCCACTTCCATTTATCGCCAGTCCTCTTCGCTCTCCGCTCACGAAAAACACAAATCTCGCGCCGATTGGATAAAGCAGCTCAACGATCCTCTCGAGGCCATCGATCCCGAGATCGCCGACATAATCGAACTCGAAAAGGCGCGTCAATGGAAGGGGTTCGAACTTATACCTTCGGAAAATTTCACGTCGCTGTCGGTGATGCAAGCAGTTGGATCGGTGATGACGAATAAATACAGTGAAGGATATCCTGGTGCTAGATACTATGGAGGAAACGAATACATTGACATGGCTGAGACCTTGTGTCAGAAGCGTGCACTTGAAGCTTTTCAGCTGGATCCAGCAAAATGGGGAGTCAATGTGCAATCATTATCTGGATCCCCTTCTAACTTCCAAGTTTACACTGCTTTATTGAAACCTCATGAGAGAATTATGGCACTTGATCTTCCCCATGGTGGGCATCTATCGCATGGTTATCAGACTGACACCAAGAAGATATCGGCTGTATCTATATTCTTTGAAACAATGCCATACAGATTGAATGAGAGCACTGGTTATATCGATTATGACCAGTTGGAGAAAAGTGCAGCACTTTTTAGGCCAAAATTAATAGTTGCTGGTGCTAGTGCTTATGCTCGCCTTTATGATTATGCACGTGTTCGCAAGGTCTGTGATAAGCAGAAGGCAGTTCTGTTGGCTGATATGGCACATATCAGTGGATTGGTTGCTGCCGGTGTTATTCCTTCTCCTTTTGATTATGCAGATGTTGTAACAACCACGACACATAAGTCACTTCGTGGACCACGTGGGGCTATGATTTTCTTCAGGAAGGGTGTGAAAGAGATAAACAAACAAGGGAAGGAAGTGTTGTATGACTATGAAGACAAAATAAACCAGGCTGTTTTTCCTGGACTTCAAGGTGGTCCACACAATCACACTATTTCAGGCTTAGCAGTTGCACTGAAGCAGGCTATGACACCAGAATTCAAGAATTACCAAAAGCAAGTACTTAGCAACTGCTCAGCATTTGCACAGAGTTTGTTAGAAAAAGGCTACGAACTTGTATCTGGTGGAACTGACAACCATTTAGTGTTGGTGAACTTAAGAAACAAGGGTATTGATGGTTCTAGGGTTGAGAAGGTACTGGAAGCAGTTCATATAGCTGCCAATAAAAATACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAGTAGCTGAATACTTTGATGCGGCTGTCAAGTTAGCCTTGCAGATTAAGGAAAATACCAATGGTACAAAGTTGAAAGATTTTGTGGCAGCTATGCAATCAGATGAACAAATTCAATCTAAGATTGCTAATCTCTGTCATGAAGTTGAGGATTATGCTAAGAAGTTTCCCACTATTGGTTTTAACATAGAAACAATGAAGTATGGTAAGTGA 1524 0.4311 MAMALRRLNKPFSNATSIYRQSSSLSAHEKHKSRADWIKQLNDPLEAIDPEIADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARVRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQAMTPEFKNYQKQVLSNCSAFAQSLLEKGYELVSGGTDNHLVLVNLRNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEYFDAAVKLALQIKENTNGTKLKDFVAAMQSDEQIQSKIANLCHEVEDYAKKFPTIGFNIETMKYGK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01832 507 Gene3D - 74 347 IPR015421 GO:0003824
Gma14g01832 507 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 268 284 IPR019798 GO:0030170
Gma14g01832 507 CDD SHMT 49 469 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma14g01832 507 SUPERFAMILY PLP-dependent transferases 33 498 IPR015424 -
Gma14g01832 507 Pfam Serine hydroxymethyltransferase 45 442 IPR039429 -
Gma14g01832 507 PIRSF SHMT 25 502 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma14g01832 507 Gene3D Aspartate Aminotransferase, domain 1 49 494 IPR015422 GO:0003824
Gma14g01832 507 Hamap Serine hydroxymethyltransferase [glyA]. 44 497 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma14g01832 507 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 23 506 - -
Gma14g01832 507 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 23 506 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01832 Gma-Chr14 48861024 48868539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01832 K00600 - gmx:100812952 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01832 14 48861024 48868539 Gma14g01832 14 48861024 48868539 ECH
Gma14g01832 14 48861024 48868539 Gma02g02060 02 46275965 46282700 GST