Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01831 ATGGACTTGGTGGTACCCCATATACAGTTTTGCTCATATAAACACTTCTACCCAGAAAGCTATAGCACTGGTTCTGCATTCAATTCGGTGAGGGTATGCAATATGGCCTGCAAATCTCAAATATTTGTTCTGCCTGATCATATTAGGGTTATTGATTTTAGAAAACCCAATGGCACGTGGTCTACAAAGCATTTGGGCAATTGCGTGTTTGCTGTTTCAAAATATGAAAATTCTGGTTCGAAAGGTATTTTGCAACGTTTTGAAAGATTACCGAAAGGTGCTTTAAATGGTGTGGAATCTTCCTCGGCAAATGGGGTCAATACTTCCCTGAATTTTGAAGAATCTGAGATTCATCATCTCCATGTGTTGATTAAAAATGGGGAATTGGATGAAGCATCTAGGTTTCTTGAGTATATGACTAACAAAGGCAATATATATGCCTTGTGGGAGGTAGAGGAAGCTTTGAGAGTTTTGGATTGCATGAGTGTTTCTCCAAATGGCATTAATTATGATACAATTTTGCGGAGCTTGTGTGATAGATGTAAATTGAAGCAAGGCATGGAAGTACTTGACAGACAACTGCAAATTAAGTGTTACCCAGATGTAGTAACATACACTGAATTGATTGATGCAGCTTGTAAAGATAGTAGAGTTGGTCAGGCAATGAAGCTGTTGATTGAGATGCCCGATGTTATTTCCTATACTATTGTCTTGCATAGCTTGTCTAGTGGTGGAAGATGGACGGATGCTATGAAACTATTGGCTAGCATGCTTTGTAAGGGGTGTTCCCTGAATGTTGTTACTTTCAATACCTTGATCAATTTCTTGTGCCAGAAAGGCTTACTAGGTAAAGCCTTTAATGTCTTGGAGATGATACAAAGCATGGGTTGTTACCCAGATATAGTGACCTATAATATTCTGCTAGCTGCATTATGCAAAGATAGGAAGGTGGATGATGCAGTTGAGATACTAAAGCAACTAAGTTTCAAGGGTGCCCTCCAGTTCTAA 1008 0.3909 MDLVVPHIQFCSYKHFYPESYSTGSAFNSVRVCNMACKSQIFVLPDHIRVIDFRKPNGTWSTKHLGNCVFAVSKYENSGSKGILQRFERLPKGALNGVESSSANGVNTSLNFEESEIHHLHVLIKNGELDEASRFLEYMTNKGNIYALWEVEEALRVLDCMSVSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIQSMGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGALQF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01831 335 PANTHER OS02G0565400 PROTEIN 47 145 - -
Gma14g01831 335 PANTHER OS02G0565400 PROTEIN 289 331 - -
Gma14g01831 335 Pfam PPR repeat 232 262 IPR002885 -
Gma14g01831 335 Pfam PPR repeat 121 143 IPR002885 -
Gma14g01831 335 Gene3D Tetratricopeptide repeat domain 117 229 IPR011990 GO:0005515
Gma14g01831 335 Gene3D Tetratricopeptide repeat domain 230 333 IPR011990 GO:0005515
Gma14g01831 335 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 265 299 IPR002885 -
Gma14g01831 335 Pfam PPR repeat family 265 313 IPR002885 -
Gma14g01831 335 TIGRFAM PPR: pentatricopeptide repeat domain 267 301 IPR002885 -
Gma14g01831 335 TIGRFAM PPR: pentatricopeptide repeat domain 232 266 IPR002885 -
Gma14g01831 335 TIGRFAM PPR: pentatricopeptide repeat domain 302 330 IPR002885 -
Gma14g01831 335 PANTHER ATPASE EXPRESSION PROTEIN 3 150 228 - -
Gma14g01831 335 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 230 264 IPR002885 -
Gma14g01831 335 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 300 334 IPR002885 -
Gma14g01831 335 PANTHER OS02G0565400 PROTEIN 229 296 - -
Gma14g01831 335 PANTHER OS02G0565400 PROTEIN 150 228 - -
Gma14g01831 335 PANTHER ATPASE EXPRESSION PROTEIN 3 47 145 - -
Gma14g01831 335 PANTHER ATPASE EXPRESSION PROTEIN 3 229 296 - -
Gma14g01831 335 PANTHER ATPASE EXPRESSION PROTEIN 3 289 331 - -
Gma14g01831 335 Pfam PPR repeat 198 228 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01831 Gma-Chr14 48846530 48848682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01831 127 334 Glycosyltransferase AT1G05670 34.112 1.70e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01831 - - vra:106763474 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01831 14 48846530 48848682 Gma02g02057 02 46263884 46266358 GST