Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01823 ATGGGTTGGATAGAAGCCATTTACACGCTTTTAACCAAATCATTCACCGTCCTTTCCTGGCCTCCAGTCAGTTTTCTTTGTCCATTGTTTGTTTCTGTTCGGGTAATGAAGAGTGATTCCCGGTCCAGCAACCAGCGATGTCTCGCTTTTTGGGTTTTGTATTCCTTGTGTATGATCATGGAAGGGGAACTTTCAGTGCTATTTAACTGCCTCCCATGGTGGCCTCATGTGAAATCCATAGCAACTATCTTGCTGTTGATACCTTATGTTGGTGCAGCACCATATGTCTATAAATTCTTAATTAGACACTACTTTACTTGGAGCCTATTTACAAGGACATCAAACATcttcagtgagaagagcacacatttggaatcagatgaggatagtaaacttgttgatgtctctgaccagatgacaagtcaaatacaagaaaagaaacttgaagcatatcaagtattggtttcaagtttataccgcagtattttcatgcctttacagcaaattactgacaacttcagtgagaagagcagaaatttggaatcagatgaggatagtaaactttttaacgtctctgaccagacaataacgacaagtcaaatagaagaaaagaaacttgaagcatatcagGAGACAGATGATATCGCTGGTTGTGACAAGACAGAAAGCAGTTACACAAGGCTAACTATTAAAAATCTAGTCCAGAAGGAATGGAGTTGTGCATTATGTCAGATTAGTACAACCAGTGAAAATTGCTTAAGGGCACATCTTAAAGGGAGGAAACACAAGGATAAGGAAAATGAGCTTAGAGTTGAGTTTTCCTCTACTCAGAAAAGAATCAAAGGGATGGTTCTACTAAGGAATCTCAACCAAATTGCAAGCATTCTCAATCCAGTTTCCAGATCCATAAGATGGTGTGAATGGACAAAGCCAGAGTTTGGATGGACAAAATTAAATACTGATGGTTCTATTCATAGTAACACTGTTAGTTTTGGTGGGCTGCTTCGAGATTACAGGGGTGAACCAATATGTGCTTTTGTCTCCAAAGCTCCTCAAGGAGATGTTTTCTTGGCTGAGCTGTGGGCCATATGGAGAGGCCTTGTTCTTTCCTTGGGTCTTGGGATTAAAGCAATATGGGTGGAATCAGACTCCATGAGTGTTGTGAGGACGGTTAATAGAAAGCAACTTTGTCCAAAAGCTGTTGGCTATTTGAACCAGATATGGAAACTGTTAAAGAAGTTTGATAAATATCAAATTTCTCACTCGTGGCGCGAAACTAATAGGGCAGCAGATCATCTTGCTAAGATGAATCTTTTGGCAAATGATGTGGTTTTGTCGCCAGTTGATTTTCCACCTAGCCTTTCCAGAATCATTGAAGATGATGCCAAAGGAACGAAATATCGTAGACGATGA 1413 0.327 MGWIEAIYTLLTKSFTVLSWPPVSFLCPLFVSVRVMKSDSRSSNQRCLAFWVLYSLCMIMEGELSVLFNCLPWWPHVKSIATILLLIPYVGAAPYVYKFLIRHYFTWSLFTRTSNIFSEKSTHLESDEDSKLVDVSDQMTSQIQEKKLEAYQVLVSSLYRSIFMPLQQITDNFSEKSRNLESDEDSKLFNVSDQTITTSQIEEKKLEAYQETDDIAGCDKTESSYTRLTIKNLVQKEWSCALCQISTTSENCLRAHLKGRKHKDKENELRVEFSSTQKRIKGMVLLRNLNQIASILNPVSRSIRWCEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCPKAVGYLNQIWKLLKKFDKYQISHSWRETNRAADHLAKMNLLANDVVLSPVDFPPSLSRIIEDDAKGTKYRRR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01823 470 SUPERFAMILY Ribonuclease H-like 315 438 IPR012337 -
Gma14g01823 470 CDD RNase_H_like 318 435 IPR044730 -
Gma14g01823 470 Pfam Zinc-finger of C2H2 type 238 262 - -
Gma14g01823 470 PANTHER HVA22-LIKE PROTEINS 2 470 IPR004345 -
Gma14g01823 470 Pfam Reverse transcriptase-like 319 436 IPR002156 GO:0003676|GO:0004523
Gma14g01823 470 PANTHER PROTEIN A, PUTATIVE ISOFORM 1-RELATED 2 470 - -
Gma14g01823 470 SMART ZnF_U1_5 235 269 IPR003604 GO:0003676|GO:0008270
Gma14g01823 470 Pfam TB2/DP1, HVA22 family 28 104 IPR004345 -
Gma14g01823 470 Gene3D Classic Zinc Finger 219 268 - -
Gma14g01823 470 Gene3D - 315 438 IPR036397 GO:0003676
Gma14g01823 470 SUPERFAMILY beta-beta-alpha zinc fingers 231 270 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01823 Gma-Chr14 48715163 48718666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01823 - - gmx:100787629 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01823 14 48715163 48718666 Gma14g01823 14 48715163 48718666 ECH
Gma14g01823 14 48715163 48718666 Gma02g02048 02 46132319 46135359 GST