Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01805 ATGCGTGTCACCATCGATCTAGGGTTCTGGAGCCTGGTCGTCGTCGCGGTGGTCGGCCTCATCGTGCCGGCGATCGCCTTCGTCGTCCGGCGCCAGTGCCAGCGGGCGGCTGCCAGGGCAGAGGAGATTAAGAGGCTCCTCGTTCTCGCTGAGGAGGAGTCCGTGAGGGCCGAGTCAGAGTCGGAGGCTTCGGTCTACCAGCAAAACGGCATCGTTTCAGCACCGCCGAAGAACAAAGTATGCGCAGTGTGTTACTCTCCCACCACCACGCGCTGCGCCAGGTGCAAAGCGGTTCATTACTGTTCTGGAAAGTGCCAAATTGTTCATTGGCGCCAAGGTCACAAAGATAAATGTCATCCTCCCAGTCCAACTTGCCAGACTGAGGATCTGGTAAGTGATCTTGGAAAGAAGGTAGCAGAACCAGACTATCGTGGAATCCATGATGAGAAGTCTCAGACTAAAAGCACAGAGTATGCAACATCATCTGAGAAACCCCCGTTGTCTGATATGAGGTGTTCTCCTGATATTTCACGTGCAAAGGATGATAGTGTAAGAGTTGAGTCTCTTCAAGAGGGAAATGTTACAGGCTCTAATTCTGAATTATCTAGTAACTCATTCTCTGGATTCTCAGCTTCCACTGGTGCTAGTGAATCATCTGATGATTCTTCTGTCTGTGAGAGTGTCACCTCGAATGAGTATGAGAGATGCGAGGGACATAATTTTGTGGACCCCACCAATGACATTTCTGATACCACTTCAAGTCGTAATAGCATTGGCGAATCCATTCCATTATCACCTAAGTTTGCTAGTTTGGTTGATTCGGTTGATGGTTATCCTGCAATGCATAAATTAAATCAAGTTAGGCCTGCTTTTGGTAAAGAAGAGAGTAAGCTCACATCAAATGGTAGTTCTGGTCTGCGTATACGGAAAGGGGCAGCAATTGAACCTTCTACAGTGTCTTCTGGATTCTGGAATACAACTCGTGATTCCACGAGGATAAAAGATGGCTCTAATAGTGAGCCTCTTTCATCCCACTCTGATGATTCTGCTCCAAAGTCAGTTAATAATATGCCATGTGCAAGATCAGCATCTTCAGAAAATGAGGGTGATTCTTTAGGTTGTGCTGATGCTTTGAGCATCCATAATTTGCAAACAGTTGGTTCTAGGGTATCAAATCATGTTATCAACCCTGGTAGCACCTTGAAGTCATCAGAAAGTAGATGTCTGCCACATGCAGTTGCTGATACTAAGTTAGTTTCTAGAACTGAAGAGCATTCACATTATAGTACAAAAGGTGGGAATAATGGCATCCTATCTGGCACTGCTACTTCAAATTCTAAAAATGACCTGAAAACATCTGTTCTAAAAGTTTCTGGTCAGCTTAGAGGATCAAGGTTGTCTAAACCCTTTCCATCAGCTGTTGGGAGTTATATTACTGGAAAATACAGTGATAAGGGTCTTTTTCCATATGATTTGTTTGTCAAGCTTTATAATTGGAACAGAGTGGAGTTGGAACCATTTGGCCTTATAAACTGTGGAAACAGCTGTTATGCTAATGCTGTACTCCAGTGCTTGGCATTTACACCTCCCCTGACTGCTTATTTGCTTCAAGGACTTCATTCTAAATCATGTGCAAATAAAAAATGGTGTTTCACCTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAAGACACAAACTCTCCCATCTCACCTGTAGGCATACTTTCTCAACTACAGAATATTGGGAGTCAACTTGGTAATGGAAGAGAAGAAGATGCACATGAATTTCTAAGGCTTGCTGTTGAGACAATGCAATCTGTTTGCCTTATGGAATCTGGGGATAACATGTCAGATTCATTGAAAGAGGAAACTAATTTAATGGGCCTAACATTTGGAGGTTACCTCCAATCAAAGATAAAATGCATGAAATGTGGAGGGAAATCTGAGTGTCAAGAAAGGATGATGGATCTGACAGTTGAGATAGAAGGGGAGATAACAACCCTGGAGGAGGCCCTTCAACAGTTTACAAGTGCTGAGACTCTGGATGGAGAAAACAAGTACCACTGTGTCAGGTGTAAATCTTACGAGAAGGCCAAGAAGAAAATGACAGTTTCGGAGGCACCTAATGTTCTTACTATTGCATTAAAGAGATTTCAGTCGGGAAAGTTTGGGAAGCTCAATAAACCTATTCGGTTTCCAGAAATACTGGACTTGGCACCTTTCATGAGTGGGACTAGTGATTTGCCTATATACAGGCTATATGGGGTAGTTGTTCACCTGGATATCATGAATGCTGCTTTTTCAGGTCATTATGTGTGCTATGTGAAGAATTTCCAAAGCAGGTGGTTCAAGGTTGATGATAGTGTGGTAACAGCTGTTGAATTGGAAAGTGTCTTGGCTAAAGGAGCATACATGCTTTTTTATGCAAGGTGCTCACCTAGGGCCCCAAGATTAATCAGGAACAGTATAGTATCTTCAGACTCAAAATGGAAACTCAAGGGAAAAACTGCCACAATGAAGTTGAGGCGACTACCTACCGGTGCTGGTGTTAATTTGACTTCTCCAGATGGTTCACCCTCCTTAGATACACTCTATTTGAAGTTTCTCCACCCGAAAATGATTTTGGAAGATGACTCGTCAAGTGATAATTCATCCCTTATCAGCAGCAATTCTGATGAAGGTTCTTGTAGTACAGATAGCACAAGTGATTCAACCGGTACAGATGACTTTGCAGATTATATTTTCAGTGATGCGGGACGTGGCGCAGGCGGCATATTGAGAAATTCTGATTCCAGCATCTCCCCTGCATTGTCATCCTCTCCCCACTCTAGATATTTTCCCTCTTCTGATATAGACCATGATTCAGTAGTTTTGCCACATTCAACTGGGTTCCAGCCATCTCCTTCAGACGGTCTTTTGTACAGGAACAGAGTAGTGGATGTTAAAAGGAGTGGGGGAGGTGTTTTTCATTTTCATCCTGACACAAATATAGAGCATAGGAAGTTAGATACAACTACAAGTAGGAGTAACTGCAGTAGTTTTAGGGATACTGACTCTGTACAGAGAGCAGGATCCAACCATTTTAATGATAGAAATTCTGGTGTATCATATACAAATTCTAGGGACAGAACGGATTGA 3138 0.4308 MRVTIDLGFWSLVVVAVVGLIVPAIAFVVRRQCQRAAARAEEIKRLLVLAEEESVRAESESEASVYQQNGIVSAPPKNKVCAVCYSPTTTRCARCKAVHYCSGKCQIVHWRQGHKDKCHPPSPTCQTEDLVSDLGKKVAEPDYRGIHDEKSQTKSTEYATSSEKPPLSDMRCSPDISRAKDDSVRVESLQEGNVTGSNSELSSNSFSGFSASTGASESSDDSSVCESVTSNEYERCEGHNFVDPTNDISDTTSSRNSIGESIPLSPKFASLVDSVDGYPAMHKLNQVRPAFGKEESKLTSNGSSGLRIRKGAAIEPSTVSSGFWNTTRDSTRIKDGSNSEPLSSHSDDSAPKSVNNMPCARSASSENEGDSLGCADALSIHNLQTVGSRVSNHVINPGSTLKSSESRCLPHAVADTKLVSRTEEHSHYSTKGGNNGILSGTATSNSKNDLKTSVLKVSGQLRGSRLSKPFPSAVGSYITGKYSDKGLFPYDLFVKLYNWNRVELEPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKWCFTCEFESLILKSKDTNSPISPVGILSQLQNIGSQLGNGREEDAHEFLRLAVETMQSVCLMESGDNMSDSLKEETNLMGLTFGGYLQSKIKCMKCGGKSECQERMMDLTVEIEGEITTLEEALQQFTSAETLDGENKYHCVRCKSYEKAKKKMTVSEAPNVLTIALKRFQSGKFGKLNKPIRFPEILDLAPFMSGTSDLPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESVLAKGAYMLFYARCSPRAPRLIRNSIVSSDSKWKLKGKTATMKLRRLPTGAGVNLTSPDGSPSLDTLYLKFLHPKMILEDDSSSDNSSLISSNSDEGSCSTDSTSDSTGTDDFADYIFSDAGRGAGGILRNSDSSISPALSSSPHSRYFPSSDIDHDSVVLPHSTGFQPSPSDGLLYRNRVVDVKRSGGGVFHFHPDTNIEHRKLDTTTSRSNCSSFRDTDSVQRAGSNHFNDRNSGVSYTNSRDRTD 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01805 1045 MobiDBLite consensus disorder prediction 879 904 - -
Gma14g01805 1045 Gene3D Cysteine proteinases 500 820 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 188 230 - -
Gma14g01805 1045 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 19 1028 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 319 370 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 244 259 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 140 154 - -
Gma14g01805 1045 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 507 811 IPR028889 -
Gma14g01805 1045 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 1028 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 1007 1045 - -
Gma14g01805 1045 Gene3D - 69 121 - -
Gma14g01805 1045 Pfam Ubiquitin carboxyl-terminal hydrolase 507 808 IPR001394 GO:0004843|GO:0016579
Gma14g01805 1045 SUPERFAMILY Cysteine proteinases 505 814 IPR038765 -
Gma14g01805 1045 SUPERFAMILY HIT/MYND zinc finger-like 76 120 - -
Gma14g01805 1045 Pfam MYND finger 81 118 IPR002893 -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 293 312 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 420 444 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 429 444 - -
Gma14g01805 1045 ProSitePatterns Zinc finger MYND-type signature. 81 118 IPR002893 -
Gma14g01805 1045 ProSiteProfiles Zinc finger MYND-type profile. 81 118 IPR002893 -
Gma14g01805 1045 Coils Coil 33 60 - -
Gma14g01805 1045 MobiDBLite consensus disorder prediction 140 259 - -
Gma14g01805 1045 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 508 523 IPR018200 GO:0004843|GO:0006511
Gma14g01805 1045 MobiDBLite consensus disorder prediction 319 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01805 Gma-Chr14 48454280 48460912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01805 487 815 Miscellaneous Gene Families AT4G31670 51.964 1.56e-121 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01805 K11855 - gmx:100782303 1965.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01805 14 48454280 48460912 Gma14g01805 14 48454280 48460912 ECH
Gma14g01805 14 48454280 48460912 Gma02g02024 02 45807538 45813651 GST