Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01445 ATGTGTCCACTAACACCGAGTGACTTGCTGCGGATTTTCGAGAAGGTGGACATGAATGGCGATGGGTTTTTGAGCCTTGAGGAGTTGAAGATGCTGCTAGAGAAGACAGGGTTCGGTTATAGCATTGAGGAATTGGAGTCTTTGGTGGGAAAGAAAAGCCTCGACTTCAGTGAGTTCTTGTTCTTTTATGAATCTAGGTTGAAGCAGAACAATAATGGGGAGAAGGAATTAGGGGCTAGTGGGGGGGATGATAGTGATGAGGTTGAGGAAGTGGAGAGGGACCTTGTCAAGGCTTTCAAGGTGTTTGATTTGGATGATGATGGGTTCATCACAAGCCAAGAGCTTGAGTGTGTGTTGAAGAGGCTTGGCATGTGGGATGATGAAAGGTGTGGCAAGGATTGTGCATCCATGATTTGCTCCTATGACACTAACTTTGATGGCAAGCTTGATTTTCAGGAGTTTAAGGGCATGATGCTTCTTACAACTTCATGA 492 0.4533 MCPLTPSDLLRIFEKVDMNGDGFLSLEELKMLLEKTGFGYSIEELESLVGKKSLDFSEFLFFYESRLKQNNNGEKELGASGGDDSDEVEEVERDLVKAFKVFDLDDDGFITSQELECVLKRLGMWDDERCGKDCASMICSYDTNFDGKLDFQEFKGMMLLTTS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01445 163 ProSiteProfiles EF-hand calcium-binding domain profile. 90 125 IPR002048 GO:0005509
Gma14g01445 163 CDD EFh 94 158 IPR002048 GO:0005509
Gma14g01445 163 Pfam EF-hand domain pair 94 158 IPR002048 GO:0005509
Gma14g01445 163 ProSiteProfiles EF-hand calcium-binding domain profile. 129 163 IPR002048 GO:0005509
Gma14g01445 163 Pfam EF hand 12 32 IPR002048 GO:0005509
Gma14g01445 163 ProSitePatterns EF-hand calcium-binding domain. 103 115 IPR018247 -
Gma14g01445 163 PANTHER CALCIUM-BINDING PROTEIN CML44-RELATED 2 163 - -
Gma14g01445 163 Gene3D - 6 67 - -
Gma14g01445 163 Gene3D - 68 162 - -
Gma14g01445 163 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Gma14g01445 163 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Gma14g01445 163 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 2 163 - -
Gma14g01445 163 SUPERFAMILY EF-hand 7 160 IPR011992 -
Gma14g01445 163 SMART efh_1 133 161 IPR002048 GO:0005509
Gma14g01445 163 SMART efh_1 8 36 IPR002048 GO:0005509
Gma14g01445 163 SMART efh_1 94 122 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01445 Gma-Chr14 30771526 30772701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01445 4 159 EF-hand Containing Proteins AT1G21550 40.764 8.57e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01445 K13448 - gmx:100500561 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01445 14 30771526 30772701 Gma14g01445 14 30771526 30772701 ECH
Gma14g01445 14 30771526 30772701 Gma04g02339 04 53817449 53818235 PCT
Gma04g02339 04 53817449 53818235 Gma14g01445 14 30771526 30772701 PCT