Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01222 ATGCTTCTAACTCACATTCACGTTTTCTCTCCCTTCACACGTTTCACTTATGCACTTCATGCCTCGCCCGTCCGTGCCTCTTCCGCTCCAACACGGCGTCGTTTGGTCAAAACCGCCGCTCCTCAGGAACCGAAGAATCTCCGGCACCTCACTTCGCGCATTGTTCAACTCACTCGCCGAAAACAGCTCCGCCAGATTTTGGATGAGGTTGAGGTTGCGAAGAAGCATTTCGGGAAGCTGAACTCGATTGTGATGAACGCGGTGGTGGAGGCTTGTGTTCGATGCGGCGACATCGATTCGGCAATTAGAATATTCGATGAGATGAAAAAGCGCGATGGTTGTGGTGTGGATACTGTCACGTATGCCACGCTTTTGAAGGGATTAGGTGAGGCACGAAGAGTTGATGAGGCTTTTGAATTGCTTGAAACTGTGGAAAATGGCACTGCCACAGGAAGTCCAAACTTGTCAGCTCCATTGATCTTTGGTCTGCTAAATGCCTTAATCAAAACAGGAGACTTGCGTCGTGCAAATGGTCTCCTTGCTCGTTATGGTTTTGTGCTTCGTGAAGGTGGCAATTTTTCAGTCTCAGTATACAACATACTAATGAAGGGCTACATAAACTCTGGTTGTCCACACACTGCCATAAACATGCTCAATGAAATTTTACGTCAAGGCATAATGCCTGACAGGCTCACATATAACACACTAATTTTAGCATGTGTCCAGAGTGGAAAGTTGGATGCTGCAATGCAATTTTTTGAGGAAATGAAGGGTAAAGCTCAGAAGTTCAGCAATCATGATCTGTTTCCAGATATTGTTACATATACAACAATGCTTAAGGGTTTTGGGCAGACTAAGGATCTCGCTACAGTTCTGAAAATAGTGTTGGAAATGAAGTCTCATCGTGAATTATACATTGATAGAACTGCTTACACTGCAATAATTGATGCTTTTCTAAAATGTGGCTCAGTTAAGGGTGCTCTGTGTATTTTTGGAGAAATATTGAAGCAGACTGGTCTGAATCCAGAGTTGAAGCCAAAGCCTCACCTCTATCTTTCCTTGATGCGTGCCTTTGCTTTTCTAGGAGATTATTATCTCGTTAAAAAATTGCATAAACGGATTTGGCCTGATTCAGCAGGAACCATATTATTAGTTGCTCAAGAAGAAGCTGATCACCTTCTCATGGAAGCAGCACTGAATGCTGGTCAGGTTAATGTTGCCGTTAAAACTCTTACTGAGATTGTTTCAAAATGGAAGGGCATATCCTGGACAAGTCGTGGGGGCATGGTTGCTTATCGTATTGAGGCCTTGTTGGGATTCTCAAAGTCATTATTCAGTCCTCACTTACTTCCTCAGGTTTCACCTTCTGAACCGGTTGAGAATTATATGATACAATTTGAAGCAACACGGCCACTACAAGGTTCCATAAAGCTGAGGAAAGTGGTTATGCGTTTTTTTTATGAAGCAGTTGTTCCTATTGTAGATGAGTGGGGCAGTTGTACAGGGCTGTTACATCGTGAAGACTGCATAGAGTTGGATGCTCCACTTACAACAATGATGAGAAGTCCTCCTCCCACTGTTACGACTTCAACATCTATTGGTCATGTAGTTGATTTAATTTTAGAGAAGCGATACCCAATGATTATTGTTGTAAATTACAGAAATTCATATGCTACTACTCCATACAGCTCAAGAGCAGTTGGAGTTTTTACATCAGAACAGTTGAGTAGGTTTATCACACCTGTATCTCAAGTAAAAGGGACAGACCTTTAG 1773 0.4281 MLLTHIHVFSPFTRFTYALHASPVRASSAPTRRRLVKTAAPQEPKNLRHLTSRIVQLTRRKQLRQILDEVEVAKKHFGKLNSIVMNAVVEACVRCGDIDSAIRIFDEMKKRDGCGVDTVTYATLLKGLGEARRVDEAFELLETVENGTATGSPNLSAPLIFGLLNALIKTGDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINSGCPHTAINMLNEILRQGIMPDRLTYNTLILACVQSGKLDAAMQFFEEMKGKAQKFSNHDLFPDIVTYTTMLKGFGQTKDLATVLKIVLEMKSHRELYIDRTAYTAIIDAFLKCGSVKGALCIFGEILKQTGLNPELKPKPHLYLSLMRAFAFLGDYYLVKKLHKRIWPDSAGTILLVAQEEADHLLMEAALNAGQVNVAVKTLTEIVSKWKGISWTSRGGMVAYRIEALLGFSKSLFSPHLLPQVSPSEPVENYMIQFEATRPLQGSIKLRKVVMRFFYEAVVPIVDEWGSCTGLLHREDCIELDAPLTTMMRSPPPTVTTSTSIGHVVDLILEKRYPMIIVVNYRNSYATTPYSSRAVGVFTSEQLSRFITPVSQVKGTDL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01222 590 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 81 111 IPR002885 -
Gma14g01222 590 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 271 301 IPR002885 -
Gma14g01222 590 TIGRFAM PPR: pentatricopeptide repeat domain 197 229 IPR002885 -
Gma14g01222 590 TIGRFAM PPR: pentatricopeptide repeat domain 119 142 IPR002885 -
Gma14g01222 590 TIGRFAM PPR: pentatricopeptide repeat domain 273 301 IPR002885 -
Gma14g01222 590 TIGRFAM PPR: pentatricopeptide repeat domain 232 257 IPR002885 -
Gma14g01222 590 TIGRFAM PPR: pentatricopeptide repeat domain 310 341 IPR002885 -
Gma14g01222 590 TIGRFAM PPR: pentatricopeptide repeat domain 85 117 IPR002885 -
Gma14g01222 590 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 194 228 IPR002885 -
Gma14g01222 590 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 229 263 IPR002885 -
Gma14g01222 590 SUPERFAMILY CBS-domain pair 490 579 IPR046342 -
Gma14g01222 590 ProSiteProfiles CBS domain profile. 519 590 IPR000644 -
Gma14g01222 590 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 342 IPR002885 -
Gma14g01222 590 Pfam Pentatricopeptide repeat domain 262 301 IPR002885 -
Gma14g01222 590 Gene3D Tetratricopeptide repeat domain 154 263 IPR011990 GO:0005515
Gma14g01222 590 Gene3D Tetratricopeptide repeat domain 264 436 IPR011990 GO:0005515
Gma14g01222 590 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 117 147 IPR002885 -
Gma14g01222 590 Gene3D Tetratricopeptide repeat domain 35 148 IPR011990 GO:0005515
Gma14g01222 590 Pfam PPR repeat family 81 128 IPR002885 -
Gma14g01222 590 Pfam PPR repeat family 195 240 IPR002885 -
Gma14g01222 590 PANTHER OS09G0431600 PROTEIN 15 586 IPR044781 -
Gma14g01222 590 Pfam PPR repeat 310 336 IPR002885 -
Gma14g01222 590 CDD CBS_pair_SF 491 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01222 Gma-Chr14 19841518 19850666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01222 163 464 Miscellaneous Gene Families AT4G11690 25.081 1.72e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01222 - - gmx:100813146 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01222 14 19841518 19850666 Gma14g01222 14 19841518 19850666 ECH
Gma17g01872 17 32397583 32408628 Gma14g01222 14 19841518 19850666 GST