Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00223 ATGAGCATCAATTCGTTGCCAATTGAATTGCTTATAACTATTGTTTCACTTCTTCCCTTCAAGGAAGCTGTGAGAACTTCTGTCCTCTCGAAGAAATGGTTAGAGTTGAACGTTTGCAAGTTCACAAAAAACATAGAGTTTGATGAACTCTTTTTTGTTAAACCTGATCAACCTAATGAAACAAGAGAAATCCAAAGAAGGACTTTTCTTGACTTCATTAATTTGTGGATTGAAAATTACAAAGGAACTTTGGTGGAGAAGTTCTCTTTTAGGTTATCAAATCCTAGAAATGGTGGTGAGATCATTGATCAATGCGTTGCTTTTGCCACAGAATGTGAGGTGAAGGAGTTGGAACTTGACTTTGCTGATCCAAACTGGAATGAAAATAATATCTATTATGGTAATTATGAGGAGGCGCTGTTTAAATTGCCAGCACGAGTTTACCAGCATGGTAGCCTTGAGTCTTTGAAGCTATATTCATGTAGTTTTGTTGAGACTGAAGTGCTTAACTTTCATGCACTCAAAGAAGTTTCTTTGGGTTGGATGGAAGTGAGACTCAGTGCTATCAAAGCTTTGCTTTCCAATTGTAACATGCTGGAGAGTTTGAGTTTTAAAAGGTGTTGGAACTCAGACAAGTTTGACCTAGGCGAAGAAGAACACACAGGTCTTAGAAAGCTTGTCCTGGACAAGTGCCGCTTTGAATTTGATGTTTTCAAAGTGAATGCACCAGATCTAAAAATTTTCCAGTACTGTGGGTTAATGAACTTTTTCATCACGGAAATTCATTCACCCGCAATGGAAGAGGCAAATATTGATTTCTCTCCAGAATATGGATTCGAAGGACTAGGTCATCCTCTTTATAATCTGGTGGAAAATCTATTTATTGTTAGAGTTTTGACTGTATGCAGTTTTGTTCTTCAGGTTATTCCTACTGGACCCGAACTGCTAGGTTTTCAAAGTGGCATGCTTGTGCAACATTTGATCTTGAAAACGGCTTTGCACAAGAACGAGTTTTTGGGAATCACATTCTTCCTCAACAGTTGCACTATGTTAGAGTGTCTCACCATTGATCTATGTTCCGAAAAAGATTTGTTTGATTATGAAGCACCTTTTGTGTTTAACCGCAAGCGATTCTGGAGTGACAATGTGGGAGTATATGAAAGCTTGAGTTTAAGTCTGGAAGTGGTGGAGATTAATGGGTTCAGTGGAACTGAGAATGAACTTCTTGTGCTCATGTATTTCATTGCTAATGGAGATATGCTGAAAAGGATTAGTATAAACATGTTGGAGGATGATTCTGGTAGGACCATGGAACCTCAAATCCGTGAAAATGCAGAATTTTTGTTGACAGTTCCAAGGGCTTCAACAAACTTAGAGATATCAATCTGTTAA 1392 0.3807 MSINSLPIELLITIVSLLPFKEAVRTSVLSKKWLELNVCKFTKNIEFDELFFVKPDQPNETREIQRRTFLDFINLWIENYKGTLVEKFSFRLSNPRNGGEIIDQCVAFATECEVKELELDFADPNWNENNIYYGNYEEALFKLPARVYQHGSLESLKLYSCSFVETEVLNFHALKEVSLGWMEVRLSAIKALLSNCNMLESLSFKRCWNSDKFDLGEEEHTGLRKLVLDKCRFEFDVFKVNAPDLKIFQYCGLMNFFITEIHSPAMEEANIDFSPEYGFEGLGHPLYNLVENLFIVRVLTVCSFVLQVIPTGPELLGFQSGMLVQHLILKTALHKNEFLGITFFLNSCTMLECLTIDLCSEKDLFDYEAPFVFNRKRFWSDNVGVYESLSLSLEVVEINGFSGTENELLVLMYFIANGDMLKRISINMLEDDSGRTMEPQIRENAEFLLTVPRASTNLEISIC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00223 463 Gene3D - 1 42 - -
Gma14g00223 463 SUPERFAMILY RNI-like 143 361 - -
Gma14g00223 463 Gene3D Ribonuclease Inhibitor 73 366 IPR032675 -
Gma14g00223 463 ProSiteProfiles F-box domain profile. 1 50 IPR001810 GO:0005515
Gma14g00223 463 SUPERFAMILY F-box domain 3 55 IPR036047 GO:0005515
Gma14g00223 463 Pfam FBD 384 426 IPR006566 -
Gma14g00223 463 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 3 415 - -
Gma14g00223 463 PANTHER F-BOX PROTEIN-LIKE 3 415 - -
Gma14g00223 463 SMART 9598neu4hmm 387 463 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00223 Gma-Chr14 1895057 1896797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00223 3 262 EF-hand Containing Proteins AT5G41840 23.985 6.80e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00223 - - gmx:102659419 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00223 14 1895057 1896797 Gma14g00223 14 1895057 1896797 ECH
Gma14g00223 14 1895057 1896797 Gma02g02716 02 52876192 52877965 GST