Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02716 ATGGCAGTGAGCTCTGACTGCTTCTGTTTGTTACCAATCGAAGTGGTTTTAACCATCCTTTCACTCCTTCCCTTCAAGGAAGTTGTGAGAACTTGTGTACTCTCCAAGGACTGGTTGGACATATGCAAGTCCACTCCAAACATAGAGTTCAATGAACTCTTTTTCGTGAAACCCGATCAATCAAATGAAACAAGAGAAGCCCAGAGAAGGGCTTTTCTTGAGTTCATAAAATCTTGGATTGAAAACCACAAAGGAGCTACTATAGACAAGTTCTCTTTAAGTTTATCAATGCCTGCAAATGTTGGCGAGATCATTAATGAATCCGTTGCTTTTGCTACACAACGTGGGGTGAAAGAGTTGGATCTTGACTTTGTTGATAGGAGTAAGAATGAGAATGGTGATTGTTCATACGATAGTGACGAGGCATTGTTTGAATTACCATCACGGGTTTATGAGCACATAAGCCTTGAGTCTTTAAAGTTGTATTCATGCAGTTTTATTGAGACTAAAGTGCTTAACTTTCATGCACTCAAAGAAGTTTCTTTGGGTTGGATGGAAGTGAGGCTTACTGCTATCAAAGCTTTTCTTTTCAACTGTAAAAAGCTTGAGTGTTTGAGTTTTACAAGGTGTTGGAACTCAGATAAGTTTGACCTAGGTGAAGAAGAACACATGGGTCTAACAAAGCTCTTCCTGGACAAGTGCAATTTTGATTTTGATTATTTCAGAGTGAAAGCACCAAATCTTAAAATTTTCAAGTATTGCGGGTGGATAAACTTTGCCGTCGTAGAAATTGATTCACTCGCAATGGAAGAGGTAGATCTTGACTTCTCTCTAGAATCATCATTTGAAGAATTTGGTCATCCTATCTACAATCTGGTGAAAGATGTTTGTACTGCTAGAGTGCTGACAGTATGTAGTTTTGTGCTTCAGGTAATTCCTACTGGTCCTGAACAGCTACGTATGGAAGTTGACATGGATGCACGACATTTGATAATGAAGACGGCCTTGGATGACGATGAGTTTATTGGAATCTCATTCTTCCTTAACAGTTGTCCCCTCTTAGAGCGTCTCACCATTGAAATAGGTCCAAAAAGTGAGCTGTCTGATTATGAACCAGCGTTTGAATTTACCAGCTTACTTTTCTGGATTGAATATTTGAATGTTTGCGAATGCTTGATTTCAAGTCTTGAAGTGGTGGAGATTAATGGCTTTAGAGGAACTCTGAATGAATATCGCTTCCTCGAGTATTTGATCTTTAGTGGGTATGTCTTGAAAAAGATTATCATAAACATGTTGAAGGATGATTCTGGTAGGACTGTGGAGTATTATTGCCGTCATATGGCAGAACTTCTGTTGACATGTCCATGCACTTCAAGAAACTTAGAGATATCAATCTTTTAA 1401 0.3876 MAVSSDCFCLLPIEVVLTILSLLPFKEVVRTCVLSKDWLDICKSTPNIEFNELFFVKPDQSNETREAQRRAFLEFIKSWIENHKGATIDKFSLSLSMPANVGEIINESVAFATQRGVKELDLDFVDRSKNENGDCSYDSDEALFELPSRVYEHISLESLKLYSCSFIETKVLNFHALKEVSLGWMEVRLTAIKAFLFNCKKLECLSFTRCWNSDKFDLGEEEHMGLTKLFLDKCNFDFDYFRVKAPNLKIFKYCGWINFAVVEIDSLAMEEVDLDFSLESSFEEFGHPIYNLVKDVCTARVLTVCSFVLQVIPTGPEQLRMEVDMDARHLIMKTALDDDEFIGISFFLNSCPLLERLTIEIGPKSELSDYEPAFEFTSLLFWIEYLNVCECLISSLEVVEINGFRGTLNEYRFLEYLIFSGYVLKKIIINMLKDDSGRTVEYYCRHMAELLLTCPCTSRNLEISIF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02716 466 Gene3D Ribonuclease Inhibitor 92 458 IPR032675 -
Gma02g02716 466 SMART fbox_2 11 52 IPR001810 GO:0005515
Gma02g02716 466 SUPERFAMILY RNI-like 107 433 - -
Gma02g02716 466 Gene3D - 2 83 - -
Gma02g02716 466 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 3 418 - -
Gma02g02716 466 PANTHER F-BOX PROTEIN-LIKE 3 418 - -
Gma02g02716 466 Pfam FBD 387 429 IPR006566 -
Gma02g02716 466 SUPERFAMILY F-box domain 5 48 IPR036047 GO:0005515
Gma02g02716 466 Pfam F-box domain 9 44 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02716 Gma-Chr2 52876192 52877965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02716 1 360 EF-hand Containing Proteins AT5G41840 22.222 1.19e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02716 - - gmx:102659419 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02716 02 52876192 52877965 Gma02g02716 02 52876192 52877965 ECH
Gma14g00223 14 1895057 1896797 Gma02g02716 02 52876192 52877965 GST